Hippoglossus hippoglossus (Atlantic halibut): 117767544
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Entry
117767544 CDS
T07778
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117767544 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117767544 (ttc37)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
117767544 (ttc37)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_19
TPR_14
TPR_8
TPR_11
TPR_17
CFAP70_TPR_C
TPR_12
TPR_CcmH_CycH
TPR_9
CFAP70_mid_TPR
ANAPC3
CABIN1_N
TTC22_N
TPR_COPA_B
Fis1_TPR_C
TPR_15
TPR_MalT
TPR_BSK1_C
COG4_N
TPR_Psidin_N
WHD_RepA_N
Motif
Other DBs
NCBI-GeneID:
117767544
NCBI-ProteinID:
XP_034451179
LinkDB
All DBs
Position
9:15285704..15301168
Genome browser
AA seq
1568 aa
AA seq
DB search
MSSKEVKTELKSAREAIKNKDYKDALRHCKAVLKLEKNNYNAWVFIGLAASELEQPDQSQ
SAYKKAAELEPEQLLAWQGLANLYDKTDQWDFKIELPNIYQKLVDLYASSDKKKCYEVIQ
KLSDIYLSDKEYLKLAKVWLQLIQLKEEEAVDKTELLQLWQEMIQLLSDGINEKEQDNET
QQHLITAFENTIVLVDPVPGEKHKKISADFINCLSKLPQEENKMKKACESMLTHYPKQSY
PLEVLCLHYLKTGILIDDTISCFSRLLDLAPNSGLGHLGLGTKALQEGRYTDAIKELSQG
LKKMSCSTGWYSLAEAQVKVHRYSDSATSCCQGLTTCVSGDKELKVKLLRLKLETLVRSG
GEKAADDALDTFSQIPDAVKDQVLVALKGRAYLNKGQIDQALKVSSELVASNPNLDQGLA
LRGLVHSAEGQHQLAEQSFLKAATLSPNCAEYYFLLGQLYWDMGEETRKDRGKAQTHLLK
AAKIDPHLGCVFRYLGHYYREIATDRGRARGCYKKAFELDDEDSESGSASVDLSMEQEDM
DTALATLESVIEKATPGSAKWAWMRRGLYYLKVGEHQHAVSDLQAALRADPDDWVCWECL
GEAYLNRRSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQTLGKFKEAAAEYLQITAQQDY
VPALKGLGECQLSLAKCLMEDCRDGGAIDLIQQAIKNLFRAMELRPGLSCLWKLLGDACT
TVSSVSSNRAQVLMPALLAGLDPNSESHVLNQAQTLKVGERCYAHALKLVSEAPSLWYDL
GLNYYHQAKLPISSEGDQNSQSLVLEKAQQCFKKAIMMDCENHSYWNGLGAISMNKGLEN
FALAQHCFIKSIQVESNNVVAWTNLGSLYLKKGNIELAHEAFKIAQSLEPLYVNCWIGQA
LIAERVGSYDTMDLFRHTTELSTHMEGVKGYAFWVCSTLLDKSNRDSELYRYNIVQMNAI
SAAHVVLCKYTERIQSDPEAFIMLGYLNEHLQLKRQALQAYQRAVELLKSTSSAEELAFA
LGCYGRALCTSGQWEEAVHVYNSTPLQELSDLTGLALAYWRAGFIPESTNAYERALAVTS
SEKEKAYILTALALLQHRQGNLDSAKTLLFKCSMLKEPISESLLCLCALGLVHGDVTLAG
AALTELLKQGSATGSVVEQRCLLTCTLLALQGNYSAVQREASRAVHSNPGNPSLWALLSR
VIPQYYPRKANGGAVAGHVACLSSMTQGKRALLYSGVNQLASGRHSGEDVHRNALKTMQR
AVLLCPDDPSAWAGLMAACHTENTACYLSGSAPCRQGMEKTLMSVVSEKVHGVEEIERPL
AQSLEGWVLQQAVTGLMLGGQLEQAEALCSQVLNVSPEHPAVMLSLRQVQCQRLLVADGG
NVLPDSVLEQLSNTVMMNRTNLGAWHWLAEVYRRQGLLVQAVMAYRQSLQLALQLGLHSG
QMASLLRLALLALGPCMAGAPGNEWKDLVVEATTEVLKLGSSPVANLFQALLQYVTKMAA
RETRRLLERLVYASSQDLPVTVVQVASWYLLRHLYAKNDPELINVLLQHAKMKGDQRLLE
FNSLLASS
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtaaagaagtgaagacggagctgaaaagtgccagagaggccattaaaaacaaa
gattacaaagatgctctgagacactgtaaggctgttttgaaactggagaagaacaattat
aatgcctgggtgtttatcggcctggcagccagtgaactggagcaaccagatcagtcccag
tcagcctataaaaaggcagcggagctggagcctgagcagctactggcatggcagggctta
gctaatctttatgacaagacggatcagtgggatttcaaaattgagctacccaacatttat
cagaagcttgttgatctatacgccagctcggacaaaaagaaatgttacgaggtgatccaa
aagttgtcagatatttatctgtctgacaaagaatatttaaagctggcaaaggtttggctg
cagctcattcagctgaaagaggaagaagctgtggacaagacagagttactgcagctgtgg
caggagatgatccagctcctctcagacggcattaatgagaaagagcaggacaatgaaaca
caacagcatttaatcacagcttttgagaacaccattgttctggtggaccctgtaccagga
gagaaacacaagaagatctcagccgactttattaattgtctctctaaactgccgcaagaa
gaaaacaaaatgaaaaaggcttgtgagtccatgctcactcactaccccaaacaaagttat
cctcttgaggtcctttgtttgcattacctcaaaacaggtatcctgattgatgatacaatt
agctgcttctcccggctcctggatctggcccctaactctgggttgggtcacttgggtctg
ggcactaaagcacttcaggaaggaagatatacagacgccataaaggaactttcgcaaggg
ttgaagaagatgagctgtagcacaggatggtacagtctggctgaagctcaggttaaagtg
cacagatactcggacagtgctacttcatgctgccaaggtctgacgacgtgtgtttctgga
gacaaggagctgaaggtcaaactgctgaggttgaagcttgagactttagtcagaagtgga
ggagagaaggctgcagatgatgctttggacaccttttcacaaattccagatgctgtaaaa
gaccaagttctcgttgcccttaaaggacgtgcatacctgaacaaaggacagattgatcaa
gcacttaaggtatcatcagagcttgtggcctccaacccaaacctggaccagggtttagct
ctgagaggactggtgcattcagctgaaggtcagcatcagctggcagagcagagtttcctg
aaggcagctaccctgagcccaaactgtgcagagtactattttttgctgggacaactctac
tgggacatgggagaagagacacgtaaggacagaggcaaagctcaaacacacttgctaaag
gcggcaaagatagatccacacctcggctgtgttttccgctaccttgggcattactacagg
gagatagctactgatcgtggtcgtgcacgaggctgttataagaaggccttcgagttggac
gatgaggattctgagtctggaagtgcctcagtggatctcagtatggagcaggaggatatg
gacactgccttagcaacactggagtcagtgatagagaaagccactcccggttcagctaaa
tgggcctggatgagacgaggcctttactacctgaaggtcggggagcatcaacacgccgtc
tctgatctgcaggcagctctgagagcagaccctgacgactgggtgtgctgggagtgttta
ggcgaggcctacctaaaccgccggagcttcacggctgcgctgaaggcatttggtaaggcc
catcaacttcagccctcctccatctacagtgtttaccaggctgctgcgatcaaacagacc
ctgggcaagttcaaagaggcggccgcagagtacttgcagatcacagcacagcaggactat
gttcctgctcttaaaggactcggggagtgccagctgtctctggcaaaatgtttgatggag
gactgcagagatgggggagccattgacctcattcagcaagctattaagaacctcttcaga
gccatggagctgcgtccaggcctgtcctgcttgtggaagctgctgggagatgcatgcacc
acagtcagcagtgtttcgtcaaacagagcacaagttcttatgcccgcgctgttggctggt
ttagaccccaactcagagagtcacgtgctgaaccaggcccagacactcaaggtcggcgag
aggtgctatgctcatgctttgaagctggtgtctgaagcccccagcctttggtatgactta
ggactcaactattatcaccaggcaaaactgccaatttcttctgaaggagaccagaactcc
caatctctggtcctagagaaagctcagcagtgttttaagaaggccatcatgatggactgt
gagaaccatagctactggaatggcctgggggcgatttccatgaacaaaggtcttgagaac
tttgctctggctcaacattgcttcatcaagtccatacaagttgagtcaaataatgttgtt
gcctggacaaaccttgggagcctctatttgaagaagggcaatatagagctcgcacacgag
gccttcaagattgctcagtccttggagccgctgtatgtcaactgctggattggacaggcg
ctgatagcagagagagtgggaagctacgacaccatggatcttttcaggcacaccactgaa
ctcagtacacatatggagggagttaaaggttatgccttctgggtatgttccaccttgcta
gataagagcaacagagactctgaactgtaccgctacaacatagtccagatgaacgccatc
tctgctgctcacgtggttctctgcaagtacacagagaggatccagtctgaccccgaagcc
ttcattatgctgggatatctgaatgagcatctgcagctgaagagacaggccttacaggct
taccaaagagctgttgaactgctgaagtccacatcctcagcagaagaactggcttttgct
ctgggctgctatggccgcgctctgtgcacctcaggccagtgggaggaggcggtgcatgtt
tataattccactccactgcaggagctcagcgatctgactgggttggctctggcctactgg
agagcaggattcattccagagagcaccaacgcctatgagcgtgccttggctgtgacgtcc
agtgagaaggagaaagcttacatcctgacagctctggccctgctgcagcaccggcagggc
aacctggactcagccaagactctgctgtttaaatgctcaatgttaaaggagcccatctcc
gagtctctgctgtgtttatgtgccctcgggttggtccacggtgatgttacactcgccggt
gctgccctgaccgagttgctgaagcagggttcagccactgggagtgttgtagagcagcgg
tgtttactcacctgcaccttgctggccctgcagggcaactacagtgcagtgcaaagagag
gcctccagagctgtacacagcaatcctggaaacccctccctgtgggccctgctgtccaga
gtgataccacaatactatcccaggaaggcaaatggtggagcagtggctggtcacgttgcc
tgtctctccagtatgacccaaggaaagagggcgctgttgtacagtggggtgaaccagctg
gctagcggaagacactcaggagaggacgttcacaggaatgcactgaaaactatgcagaga
gctgtgctgctctgtcccgatgatccttcagcatgggcgggattaatggctgcctgtcac
acagaaaacacagcctgctatctctcaggttctgctccctgcagacaaggaatggagaaa
accctcatgtcagtggtttctgagaaagtgcatggtgtggaggagatagagcgccctcta
gcccagtctctggagggatgggtactacaacaggcagtgactggtctcatgttaggggga
cagctggagcaggcagaagccctctgctcacaggtcctaaatgtttcgccagaacaccca
gcagtgatgctgtcactgagacaggtgcagtgtcagcgcctccttgtggccgatggtggt
aatgtcctcccagactccgtgctggagcagcttagcaacacggtgatgatgaaccgcacc
aacctgggggcatggcattggctggctgaggtgtatcgtaggcagggtctgctggtgcag
gcagttatggcttacaggcagagtctgcagcttgccttacagctcggcctgcacagcggc
cagatggccagcctcctccggttggccctgctagctctaggaccctgtatggcaggggcc
ccaggaaacgagtggaaggacctggtagtagaagccactactgaggttttgaagctgggc
tcatcccctgtggctaacctcttccaggccctgctccagtatgtgaccaagatggcagct
agggaaacgagacgtttgctggagaggctggtgtacgcttcctctcaagacctcccagtg
acggtggtgcaggtggccagctggtaccttctcagacacttgtatgccaaaaatgacccg
gagctgattaatgtgctcttgcaacatgccaaaatgaagggagatcagagactgttggaa
ttcaattcgctcctggcctcgtcctga
DBGET
integrated database retrieval system
