Hippoglossus hippoglossus (Atlantic halibut): 117767573
Help
Entry
117767573 CDS
T07778
Name
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X1
KO
K28108
shortage in chiasmata 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117767573
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Meiosis-specific proteins
Others
117767573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
117767573
NCBI-ProteinID:
XP_034451222
LinkDB
All DBs
Position
9:complement(6620122..6634510)
Genome browser
AA seq
1529 aa
AA seq
DB search
MNPLCSKSASEHRIIMCEHGGCLPPHIFSAVRYKAVDYVFETTTSFKVMMNLLALPAPYL
TDTHLYPHSGKLPEVTYRTPWIRGKVVSTCKLFVSGSVLEDLGGTKQPMNFTERFNVTLN
EVNRDVEKIPSSNPDSLEAEDKAVCNLKESQVNGSCHEMFFKLTTDQMKSGNQNKDLLLP
EELIVVDYLQQFKSELPTLKTKLSRLRTLPVADPLLSSAGDTISEDSIFRRCASYEKPPG
SCASDAHMCANIHEDFAKELLMKEESLLLPVVVDTFKMTTENCDSFSSICGLLDVAPELL
DEQLPILDMLHKDATVSVDKFQCDSPEEPKQEGKMNGGLIDSDRIERMMLPTELELDVSL
TLTPKTSHTRLCPSTSELEKEELSPLCRRSLVSVRAHTEMEKALWKAEKHPTFVVGFLLA
EPETPEPAVDFQPLSEAVKVLKLEKQSFITAAAELKSQMSTGTSQVYLCSNREVTESMRS
ELPSTREEKMEDFKKLSPDHELFTVGSFLTSPANKTQLPHMKKQETSLHTEAATDDSPLQ
QQNHADASQNKLLMLNVNMNNKEVKPATLTLSKPAAASNTKEEISNVRFFEVAALSSARQ
NNRDTYDCETEQSVHTPEQTVSSPPIIRDNHRHQQVTRCPPEKELDPLSTFMALRSQQVA
PVTAAPVTAAPQSSASSPAPEVERVTPPSEPHTPPQQIQRSDRRPMYMSGSVSGNVTREQ
EAAGQWKGQVISHPVSQSDPQEGQESRGIQVQATDSQQRAYSELLTIAQPCLNSARELGL
NFLVWGDFSCLTPDRTHFLLKQQERVLCRKHAQSTELIRDQELLFSKVTLIHVLVTFKEL
LLKCDLSTGLAYLTQAAETCSEQILQQLVKRMQIIFFLSHKNQEPNLKVQELQQLLAEWL
HSRKGHNNMDKILVILSVDSDDSRSTIINSLSQVAGAAVTSVRPEENKTKLNGASVVSSV
CDSVCVVVYEQHIGPDFPWNSFCLVVEYDHPGQSPWSTVCRERSISHLSFNTSISDSEKG
KDPWCLEDNVPYVLLVTEEFLNRPLLLQTLESEFNITVLERSHCPSLQMLGGTHHYAVIT
VDESTAIIIQDQDELDQEQASEGLVMRLTALCLQYNCCWVILHCPDIQGGGFSSEAFSNL
LLVYSSLVLFGTKSNDLDVKVLIVSEVCEIAKWISQICFHSLMSSDRDPLSFLNRDWLTV
IPSQEEKCLLQFPCVNPLVSQLMLRRAPSSQWLLGASLSQLGELLPEVPQKVLKLFSDTT
SLFTLTTDPNHLESQAVVTETNRQPPTPPHPEAFCSQTTTSFLFGAESAETSFCERDPDP
TVQDESTDFTFDLSCSFGGPDVHLQSSWTGGELRREELTFSGLKSRAGAVGRVVRRVNDQ
WTLGPPPNHSGFTNYLHTADDSPLKLDSTFRYSPQPPPDVSTQISAYSTVCGDFQQTNNL
HITCSLSPPTAGVTAWGRAESNDDYVSSIGGMTATSPQYGSRCWIGRERKRSGEAAGLVG
TALTPLKKGRLSYERVPGRSDGQTRLKLF
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgaacccactctgttcaaaaagcgcgtcagagcatcgcatcatcatgtgtgaacatggc
ggctgtttacctcctcacatcttctccgctgtcagatataaagctgtggactatgtgttt
gagacgaccaccagtttcaaagtcatgatgaacttgctggcactgccggcgccttacctg
accgacacccacctgtaccctcacagtggcaaactgcctgaagtcacctacaggacaccg
tggatcagaggaaaggtggtctccacctgcaaactctttgtcagtggttccgtgcttgaa
gacctgggaggaacaaaacaacctatgaattttacagagagatttaatgtgactctaaat
gaggtgaacagggatgtggagaagatacccagctctaatcctgactcacttgaagctgag
gataaggctgtttgcaatttaaaagagtcacaggtcaatggttcatgtcacgaaatgttt
ttcaagttgacaactgaccagatgaaatctggaaatcagaacaaagatctcctcctgcct
gaagagctcattgttgttgattacctgcaacaatttaagagtgaattacccacattgaaa
accaaactgtccagactgaggacgcttcccgtggccgaccctctgctgagctcagcggga
gacaccatctctgaggactcaatattcaggagatgtgcgtcttatgaaaaacctcctggt
tcgtgtgccagtgacgctcacatgtgtgcaaacatacatgaggactttgccaaagaattg
ctcatgaaggaagagtctctgctcttaccggttgttgtggacacttttaaaatgaccaca
gaaaactgcgactccttttcaagcatttgtggtcttttagatgttgctcctgaactattg
gatgagcaacttccaatcctggatatgcttcataaagatgcaacagtgtcagtggataaa
ttccagtgcgactcaccagaggagcctaaacaagaaggcaagatgaatggaggcctgata
gactcagatcgcatagaacgtatgatgcttccaactgaattggagctggacgtgtctctg
acactgactccgaagaccagtcacactcgtctgtgtccgtccacttctgaactcgagaag
gaagagttgtcaccgctctgcagacgatctttagtgtcagtgagagctcacacagagatg
gagaaggctctttggaaagcagagaagcatccaacctttgtggtgggatttctgttggca
gagcctgaaacacctgaaccagctgtggacttccagccactgtctgaggctgtaaaagtt
cttaaattagagaagcaaagctttatcactgctgctgctgaactgaagtcacagatgagc
acaggaacctcacaggtgtatttgtgcagcaaccgtgaggtcactgagagcatgaggtct
gagcttccctccaccagagaggaaaagatggaagactttaaaaagctgtcacccgaccat
gagctgttcacagttggatccttcctgacgagtcctgcaaacaaaactcagttacctcac
atgaagaaacaggaaacctctctccatactgaagctgccacagatgattctcctctgcaa
caacaaaaccatgctgacgcgtctcagaacaaactccttatgctcaatgtcaacatgaac
aacaaggaagtaaaacctgcaacactaacactttcaaaaccggctgctgcctccaacacc
aaggaggaaatttccaacgtcaggttctttgaagtcgctgccctgtcttctgctcgtcag
aacaacagagacacatatgactgtgagactgagcagagtgtccacactcctgagcagact
gtgtcctcaccaccgattatcagagacaaccacagacatcagcaggttaccagatgtcct
ccagagaaggaacttgacccactctccaccttcatggcactcagatcccagcaggtggcg
ccagttactgcagcgccagttactgcagcgcctcagagctcagccagttctccagcacca
gaggtggagcgagtaactccaccgtctgagccgcatactcctccacagcagatacaaaga
tcagacaggaggccaatgtatatgagcggttctgtgtcaggaaatgttaccagagagcag
gaagctgctggccaatggaaaggtcaagtcatcagtcatcctgtcagccagtccgaccct
caggagggacaggagagcagagggatacaggttcaagctacagacagccagcagcgggcc
tactctgagctgctgaccatcgctcagccctgtttgaactctgccagagagctggggctc
aacttcctggtgtggggagacttcagctgcctgacccccgaccgaacacatttcctcctc
aaacagcaggagagggtgctctgcagaaagcatgcacagagcacagagctgatcagagat
caggagcttctcttcagcaaggtgactctgattcatgtgctggtgacgttcaaggagctg
ctgctgaagtgcgacctcagtactggattggcgtacctgactcaggcagctgagacatgt
tcggagcagattctgcagcagctggtgaagaggatgcagatcatcttcttcctcagtcac
aagaaccaggagcccaacctcaaagtgcaggagctgcagcagctgctggctgaatggctg
cacagcaggaaaggacacaacaacatggacaaaattcttgtcatattatcagtcgactct
gacgacagcagatccacgatcatcaacagcttgagccaagtggccggtgcagctgtaacg
tcagttcgtcctgaggagaacaaaaccaaactgaatggtgccagtgtggtcagcagtgtg
tgtgacagtgtgtgtgtagtggtgtatgagcagcatataggccccgacttcccctggaac
agtttctgtctggtggtggagtacgaccatccaggtcagtctccatggtccacagtctgc
agagagaggagcatcagtcacctctctttcaacaccagcatctctgactctgagaagggg
aaagacccctggtgcctggaagacaacgttccttatgtgttgttggtgactgaggagttt
cttaaccgtccactgctgctgcagacacttgagtcagagttcaatataactgtgttggag
aggagtcactgtccgtccttgcagatgctcggagggactcatcactatgctgtgatcaca
gtggatgaaagtacagccattatcattcaggatcaggatgaactggatcaggaacaagcc
agtgagggactggtgatgaggctgactgctctctgtcttcagtacaactgctgctgggtg
atcctgcactgcccagacatccagggaggaggattttccagcgaagccttcagcaacttg
ctgttggtttattcgtctctggtgctgtttggaacaaagtccaatgatctagatgtcaag
gtgctgatagtgtccgaggtttgtgaaattgccaagtggatcagtcagatctgcttccac
agcctgatgtccagtgacagggatcctctcagcttcctgaacagagactggttgactgtg
atcccttcacaggaggaaaagtgtctgttgcagttcccatgtgttaaccctctggtgagt
cagctcatgctgaggagagctccgtcctcacagtggctcctgggggcctctctgtctcag
ctgggtgagctcctccctgaggtgccacagaaagtcctcaagcttttcagtgacaccacc
tccctgttcacactgaccacagacccgaaccaccttgagtctcaggcagtcgtcactgag
acaaaccgacaaccccccaccccccctcatccagaggcgttctgcagccaaaccaccacc
agcttcctgtttggagctgaaagtgcagagaccagcttctgtgaacgagacccagacccg
acggtgcaggatgaaagcaccgatttcacattcgacctgagttgttctttcggcggccca
gatgttcacctgcagagcagctggacgggcggggagctgcggagagaggagttgacgttt
tctggattaaaaagcagagccggagcagtggggagagttgtgaggagagtaaacgaccag
tggacacttgggcctccaccgaaccacagcggcttcaccaactacctccacactgctgac
gacagtcctctcaaactggactccacattcagatacagcccccagccaccacctgacgtc
agcactcaaatatctgcatactccacagtctgcggcgacttccagcagactaacaacctt
cacatcacctgcagtctgagccctcccactgcaggggtcacagcgtggggtcgagctgaa
agcaacgacgactacgtctccagcatcggagggatgacagcaacttcacctcagtacggc
tccagatgctggatcggacgagagaggaagaggagtggagaggctgccggtttggttgga
acagcgttgactccactgaagaagggaaggctgagctacgagagggttcccggcaggagt
gacggtcagaccaggctgaagttattttaa
DBGET
integrated database retrieval system
