Hippoglossus hippoglossus (Atlantic halibut): 117767723
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Entry
117767723 CDS
T07778
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hhip02000
]
117767723 (tmc1)
03037 Cilium and associated proteins [BR:
hhip03037
]
117767723 (tmc1)
Transporters [BR:
hhip02000
]
Other transporters
Pores ion channels [TC:
1
]
117767723 (tmc1)
Cilium and associated proteins [BR:
hhip03037
]
Other cilia and associated proteins
Stereociliary proteins
117767723 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Pro-rich
COX16
Na_K-ATPase
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
117767723
NCBI-ProteinID:
XP_034451448
LinkDB
All DBs
Position
9:19112661..19121548
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AA seq
987 aa
AA seq
DB search
MQQVRAHLTCPLDAGMRKMPRDGLITTENNSDIELEFKGDEDEESTFQEELERGRHRGRR
RDGDREKKKRGNRRRKGASKETVEEEEESQNRLEKRERRRKRAKRHQEAKGRERDEEEQA
KIKSGKKAKTRKNVKNEKTRKVEEKEEEEGEAEVRNAKGKRKHGGAKHEEKKDDGGKHTV
KEKAKEDKKKKHKKVVETSSEQEMSEEANEDNEEEDVEEKELRPESLSPEELEKLKEAVD
ERKKLIQSLRGKPWPMKKKLVTLRESQEFVEKYEGALGKGKGRRLYAYKVMMTKKWMKFQ
RDFENFKTVCIPWEMKIKEIESHFGSSVASYFIFLRWMYGINMILFGLTFGLVMVPEALM
GRPYGSISRKTVPRAEEASAMDFAVLWDCGGYAQYSVLFYGYYNSQRAIGWLKFRMPLSY
FLVGVGTVAYSYMVVIRTMARNSNESGVGDDNSFNFSWKMFTSWDYLIGNPETADNKFAS
ITTSFKEAILEEQESHKDDNIHLTRFLRVLANFLVLCCLAGSGYLIYFVVRRSQKFALDG
LDNHTWWERNEVNMVMSLLGMFCPMLFDVISALENYHPRVALQWQLGRIFALFLGNLYTF
IIALMDEINLKREEEMIIKYNISMWEASFYNSSVSGNSTAPPIIIQPADVPRGPCWETMV
GQEFVRLIISDTMTTYITLLIGDFLRAVLVRFLNYCWCWDLEAGFPSYSEFDVSGNVLSL
IFNQGMIWMGAFYAPCLPALNVLRLHVSMYLQCWAVMCCNVPQERVFKASGSNNFYMAML
LVILFLSTLPAIYTIVTIPPSFDCGPFSGKKRMFDVIAETLESDFPAWFGKVFSSASNPG
LVLPFILLMVLAIYYLQSTSKSYKEVNVELKKKLQAQNEENKKKNKRAALKAQMDLEEAT
NATSQTAQQQQETDGDEQQGSSQRPHHGKNGRNPPPPVGDQERQPLATRAPVPRPYHHDN
HGTPGYLPGFSQQSEPRVYRVPSLQRH
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggtcagagcccacctcacatgcccactggatgctggaatgaggaagatgcct
cgagacggtctgatcaccactgagaacaacagtgacattgaactggagtttaaaggtgac
gaggatgaagagtccacttttcaagaggagctggagaggggaagacacagagggaggaga
agggatggtgacagagagaaaaagaagagggggaataggaggaggaaaggagcatctaaa
gaaacggtagaagaggaagaggaatcccagaacaggcttgagaaaagagaaaggaggaga
aagagagcaaaacgccatcaagaagcaaaaggacgagagagggatgaggaggagcaggcc
aaaataaaaagtggtaagaaggcaaaaacaaggaagaatgtcaaaaatgagaaaacaaga
aaagtggaggaaaaggaggaggaggaaggagaggctgaagttagaaatgcaaagggaaaa
aggaagcatggaggtgccaaacatgaagagaaaaaagacgatggaggtaaacacacagta
aaggagaaagcaaaggaagataagaagaaaaaacacaagaaagtagttgaaacaagttca
gagcaggagatgagtgaggaagccaatgaagacaatgaggaagaggatgttgaggagaag
gagttgaggccagagtctctgtcgccggaggagctggagaaactgaaggaggcagtggac
gagaggaagaaactgatccaaagtctgagggggaaaccctggccaatgaaaaagaaactt
gtcactttacgagagtctcaggagtttgtggagaaatatgagggcgctctggggaaaggg
aaaggcagacggctctatgcttacaaggtcatgatgaccaagaaatggatgaagtttcaa
cgggactttgaaaacttcaaaactgtttgcattccatgggagatgaaaataaaggagatt
gaaagtcattttggctcctcagttgcttcttactttatcttcctgaggtggatgtatggc
atcaacatgatcctgtttggtctgacctttggcctcgtgatggttccagaggcattgatg
ggaaggccctatggcagcatctcaagaaaaactgtccccagggccgaggaggccagtgcc
atggactttgctgtcttatgggactgtgggggttatgctcagtattccgtccttttctat
ggatactacaacagccagcgtgccattggctggcttaagttccgtatgcctctgtcgtac
ttcctggtcggtgtgggaactgtggcctacagctacatggtggtcataagaacgatggcc
cgtaattccaatgagtcgggggttggagatgataacagctttaatttcagctggaagatg
ttcaccagctgggactacctgataggaaaccctgaaactgcagacaacaagtttgcctcc
atcaccaccagtttcaaggaggcgatcttagaggaacaggagagccacaaggacgacaac
atccatctgacccgttttctgcgggtgctggccaacttcctggtcttgtgctgtttggca
ggaagtggatacctcatctacttcgtagtgcgtcgctctcagaagtttgccctagacgga
ctggataatcacacctggtgggaaaggaacgaggtaaacatggtcatgtcactgctgggg
atgttctgccccatgctgtttgacgtcatcagcgccctggagaactaccacccgcgcgtc
gccctgcagtggcagctgggtcgcatctttgccctcttcctgggaaatctctacaccttc
atcatcgcattgatggacgagatcaacctgaaaagggaggaggaaatgatcataaagtat
aatataagcatgtgggaagccagtttttacaacagctccgtatcaggaaacagcactgct
cctcccatcattatccaacctgctgacgtgcccagagggccctgctgggagaccatggtg
gggcaggagtttgtccggctgatcatatctgataccatgacaacctacatcacgctgctg
attggggatttcctgagagccgtgctcgttcgttttctcaactactgctggtgttgggac
ctggaggctggatttccttcctactcggagtttgatgtcagtgggaacgtcctgagcctg
atcttcaatcaaggaatgatatggatgggcgcgttctatgcaccctgtctccccgccctg
aacgtcctccggctccatgtgtccatgtacctgcagtgctgggcggtgatgtgctgcaac
gtgccacaggaaagagtcttcaaggcctcgggatccaataacttctacatggccatgctg
ctggtcatcctcttcctgtccactctgcccgccatttacaccatcgtcaccattcctcct
tcctttgactgtggccccttcagtgggaaaaaacgtatgtttgatgtcatcgctgagacg
ctggagtccgacttccctgcctggtttggtaaagtgttcagctctgcttctaaccccgga
ctggtgctgcccttcatactgctcatggtactagccatctattacttgcaatccacatcc
aagagctacaaagaagttaatgtggaactgaagaaaaaactacaagcgcaaaatgaggaa
aacaagaagaagaacaaacgagcagcgctgaaggcacaaatggatctggaggaggccaca
aatgcaacgtcacagactgcacagcaacaacaagagacagatggagacgaacaacaaggc
agcagtcagaggcctcatcatggcaagaacggacgcaaccctccgcctcctgttggagac
caagaacgccaacctctggccaccagggctcccgtccccaggccctatcaccacgacaac
cacggcactcccgggtacctgcctgggttctctcagcaaagtgaacccagggtgtacagg
gtgccgagcctgcagagacactga
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