Hippoglossus hippoglossus (Atlantic halibut): 117767766
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Entry
117767766 CDS
T07778
Symbol
rab11fip1a
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117767766 (rab11fip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117767766 (rab11fip1a)
Membrane trafficking [BR:
hhip04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
117767766 (rab11fip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF7783
Motif
Other DBs
NCBI-GeneID:
117767766
NCBI-ProteinID:
XP_034451509
LinkDB
All DBs
Position
9:14149224..14163319
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AA seq
1245 aa
AA seq
DB search
MSLVDQSQKWFPTSVQVTVHQARSLRVKGKNGTNDSYAIMQVAKDKFSTSVAEKSVAPVW
KEEASFDLPLFHPGNAERCTLHVIVMHRAQVGLDKYLGQAVINLLDLHDDRSRTKTDWFK
LVDKSGKADKVRGEVLLDIQFMRNNMSASMFDLSMQDKPRSRISKLKDKVRGKKKDSFSD
SASAIVPSVSQVLTDSDGEADAQSLNQSPGVKKKSKLKSLFAPKSNLQRNISQSMSTLGT
LPEKNSSLSGSRSSGLNVDSPEVKKKFKFLGHKRSGSSDSKVSQGPFSLLGRSKQSNSDQ
NNFCINGSHVYTEETEPKSGSTLSLNSSGQGSVEDVHKHTSDASASRHESTDRAILEQQR
HQQEEERRQAEERHIAEVKRVEEEEKYRADARRLQEEEERRYQEEQERNRKFLEDEARRK
KQREEEEEEKRKQEEEHRMRYAAENQNLEEERRKSEEQKRQEEASMSDRLSTLFGMIRKK
EEKKEEVQQQTKEELPETAPRSDSSSLDQPISHHSTNPFEDIPLSSNESPADPQKSSRNP
QTPSAMVFLNRTAKVSAVKPRLVQILESEPPDCQTPSQLCPSPAASESTLSSVPSEPPDS
FSNFHSSLPPPNVSKSLSGSPCGSTEDLSSVESEGSSPTMADKKKKAPLPPTYHLHGNQT
GGNPIPVREMKSPSYVEADGSQQGKKMSIPLPDYESLFPKKRHGVQGHTRWDHITAEVNQ
RQRDTAPELLGPEMSVDDPVGHDPSPRSFTSQESPAMRHYQTIPEETKPMSLKKAAAPAP
PKPVLSPHPQSIGQNQYTAQQSGMRPNPSAVQGPRNTDLASREGLSGMSRDGARKALQPS
PAATLAPRPSIQMDTSPPEDQQKEAPTAKPRQRSNGNEPTQKEVPAADKNLNSNAQTLFS
QSVKSMDKKSRQARENLVEFDPFPSTELLSKDPWAQQKQKQKQEVDNLLTGNIQKEQKPE
IQGMTADDLDNIFSQDKPTDPFASFSRSNSNNQSPKRKDSEQAGFHAFQRKNSQRRSLTS
KTPPEDKGLQSQQEPASKEGTTKMAANQDLVTNDVRKEPVALQPQADVKTQSGFYKVEDQ
FGAEPFAVPSALTSSEPLQAITEEPGALSGGKTLLQAWVSPSEVQPVSAQNSNGGGQALT
ARRPHPVKPLTSVESQHATSTQTGKEIKVRDSTPGKIKVADPLGSGPYTQLTQGELITMV
VKQQTDLSKKDAKIVELEEYIDNLVVRVIEEKPSILQALNATKQV
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggtggaccagagccagaagtggtttcccaccagcgtccaggtaacggtgcac
caggctcgaagcctgcgcgtcaaggggaagaatggcaccaacgactcctacgccatcatg
caggtggccaaagacaagttctccacctcggtggccgagaaaagcgtcgctccggtgtgg
aaggaggaggcttcgttcgacctgccgctcttccacccgggaaacgccgagcgatgcacc
ctgcacgtcatcgtgatgcaccgggcacaggtgggactggacaagtacctgggtcaagct
gtgatcaacctcctggatctacacgacgacaggtcccgcacaaagaccgattggttcaag
ctggtggacaagtctggaaaagcagataaggtgcgaggggaagtgctgctagatatacag
ttcatgagaaacaacatgtcggccagcatgtttgacctgtctatgcaagacaaaccacgc
tcacgcatctccaagctgaaggacaaagtccgtggaaagaagaaggacagcttctctgac
tctgcctcagccatcgttccctctgtcagccaggtcctcactgacagtgacggagaggct
gatgctcagtcactcaatcagtctccaggagtgaaaaagaaatccaagctcaaatccctc
tttgcacctaaatccaacttgcagcgtaacatttcacagtccatgtctacactggggact
cttcctgagaagaactcatctcttagtggcagccgctcatctggcctcaatgtagactca
cctgaagtgaagaagaaattcaaattcctgggacacaagcgatcaggcagctctgacagc
aaggtgtctcagggtcctttctccctactgggtcgctccaagcagagcaacagtgaccag
aacaacttttgcatcaacggcagtcatgtgtacacagaggagacggagccaaagagtgga
tctactctcagtctgaacagctcaggccaaggctctgtggaagatgtccacaaacacacc
tcagatgcctctgcctccaggcatgaatcaacagacagagctatactggagcaacaacgc
catcaacaggaggaagagagacggcaggcagaagagaggcacatagccgaagtaaagagg
gtggaggaagaggagaaatacagggcagatgccaggagactgcaggaggaagaggagcgc
agatatcaagaggaacaggagaggaacagaaaattccttgaggatgaagcaaggaggaag
aaacagagggaggaggaggaggaagagaaaagaaagcaagaggaagagcataggatgcga
tatgcagcggagaatcagaatcttgaggaggagcgtcgcaaatcagaggagcagaaacga
caggaggaggcctccatgagtgacaggctgtcaactctgttcggaatgatcagaaagaag
gaggagaaaaaagaggaggtgcagcagcaaactaaagaggagttgcctgaaacagcccct
cgcagtgactcaagcagtcttgatcaaccgatctcccaccactccactaacccatttgaa
gacattcctctcagcagtaatgaaagtccagctgatcctcagaaatccagccgtaatcct
caaaccccatcagccatggtcttcctcaaccgcactgccaaagtgtctgcagtcaaaccc
agattggttcaaattctggagtctgaaccccctgactgccaaacccccagtcagctgtgt
ccttccccagccgcctctgagtccaccctctctagtgtcccgtctgagccccctgatagt
ttctccaacttccactcatccttgcctccaccaaacgtaagcaaaagcctgtctggttcc
ccttgtgggagcacagaggatttgtcatctgtggaatctgagggatcttcacccaccatg
gcggataagaagaaaaaagcccccctgccacctacgtatcatctacatgggaaccaaaca
ggaggaaatcccattcctgtcagagagatgaaaagtccttcttatgtagaggcagacgga
tcgcaacaaggcaaaaaaatgtctataccacttcctgattatgaatccctcttcccaaag
aagaggcacggagtacaagggcacactcggtgggatcatattaccgctgaggtcaatcag
agacaaagggacactgcacctgaacttctgggtccagagatgagtgtggatgacccagtg
gggcatgatccgagtcctaggtcgttcacatcgcaagagagtcctgccatgaggcattat
caaacaatacctgaggagaccaaacctatgtcgttaaaaaaggcagcggccccagctccc
cctaaaccagtcttatccccacatcctcaatcaatcggtcaaaaccagtacactgcccag
cagtctggcatgagacctaatccgtctgcagtgcagggaccgagaaacactgacttagca
agcagagaaggtctctctgggatgtccagggatggagcgaggaaggcgttgcagccatca
cccgcagctacacttgcacccagaccaagtatccaaatggacacaagtccaccagaagat
cagcagaaagaagcacccaccgccaaacccagacagaggtctaacggcaacgagccaaca
cagaaagaagttcctgctgctgacaaaaacctgaacagtaatgcccaaacattatttagt
cagagtgtgaaaagcatggacaaaaagagtaggcaggcaagggaaaacttggtagagttt
gacccgttccccagcactgagcttctttccaaagacccgtgggcacagcagaagcagaag
cagaagcaagaagtcgacaaccttttgactggcaacatccagaaagaacagaaacctgaa
attcagggaatgacagccgatgatcttgataacatttttagtcaagataagccaacagat
ccctttgctagttttagtcgcagcaattcaaacaaccagagtccaaaaaggaaagactca
gagcaagcgggctttcatgcttttcaaagaaagaattcacagagacggagtcttacatca
aaaactcccccggaagataaaggtctccagtctcaacaagagccagcatctaaagaagga
acaaccaaaatggcagctaaccaagacctcgtcacaaacgatgtcaggaaggagcctgtc
gcacttcagcctcaagctgacgtgaagacacagagcggtttttacaaagtagaggatcag
tttggagctgaaccttttgctgttccctctgcgttgacctcctctgagcccctccaggct
attacggaggaaccaggggctctgtctgggggaaagacacttttgcaagcgtgggtctca
ccatctgaggttcagcctgtcagtgctcagaatagcaatggaggtgggcaagccttgacg
gcacgcaggcctcatcccgtgaagcccctgacctcagttgagagccaacatgccaccagc
acccaaactgggaaggagataaaggtccgggacagtacaccggggaagattaaggtggca
gacccgttaggaagtggaccttacactcagctcacccagggggagttgatcacaatggtg
gtgaagcagcaaacagacctgtccaagaaggacgcaaaaatcgtggagctggaagagtac
atcgacaacctggtggtgcgagtcatcgaggagaaacccagtatcctgcaagccttaaac
gccaccaagcaagtgtaa
DBGET
integrated database retrieval system
