Hippoglossus hippoglossus (Atlantic halibut): 117767823
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Entry
117767823 CDS
T07778
Symbol
top3b
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03440
Homologous recombination
hhip03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117767823 (top3b)
03460 Fanconi anemia pathway
117767823 (top3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhip03032
]
117767823 (top3b)
03400 DNA repair and recombination proteins [BR:
hhip03400
]
117767823 (top3b)
Enzymes [BR:
hhip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
117767823 (top3b)
DNA replication proteins [BR:
hhip03032
]
Eukaryotic type
DNA Topoisomerases
117767823 (top3b)
DNA repair and recombination proteins [BR:
hhip03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
117767823 (top3b)
FA (Fanconi anemia) pathway
117767823 (top3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
117767823
NCBI-ProteinID:
XP_034451640
LinkDB
All DBs
Position
9:26361319..26383503
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AA seq
855 aa
AA seq
DB search
MRTVLMVAEKPSLAQSISKILSKGSCTSRKGLNGACSVHEYTGSFQGQSVRFKMTSVCGH
VMSLDFIGKYNNWDKVDPAELFSTAPTERKEANPKLNMVKFLQVEGRGCDYVVLWLDCDK
EGENICFEVLDAIQPVMNKGSSMDQSVYRAKFSSITDTDIWNAMNCLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFRPETY
WILQAKVFKGKDNPLMLDWNRVRVFDRDVGQMFVNLAKTSREAKVESVSKKEKAKQRPQA
LNTVEMLRVASSALGFGPQHTMQIAERLYTQGYISYPRTETTHYPENFDLKGTLKQQANN
PYWAEEVKALLSTGLNRPRKGSDAGDHPPITPMRAASEGELGSDGWRLYEYITRHFIATI
SQDCKYLQTTIDFSIGPEAFSCTGKTLISPGYTTVMPWLGIPLEETLPECERGDTFTVDE
IKLVEKQTSPPEYLTEAELITLMEKHGVGTDASIPVHINNICQRNYVTIENGRKLKPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLIAQGKANFQQVLQHTLDIFKRKFHYFVDSI
TGMDELMEVSFSPIAASGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYSLPQNGAIKL
YKELRCPLDEFELVLWTSGPRGKSYPLCPYCYSNPPFRDMKKGMGCNECTHPSCQHSLNS
LGIGQCVECDTGVLVLDPTSGPKWKMACNKCNVVVHFFEHAHRVQVAQESCDACEASLVA
VDFNKTRTPLPAGETQHTGCVFCDPVFQDLVELKHATMRYRGGGARRGGRGRGRGRRGNP
KKPKDKMAALAAYFV
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaggactgttttgatggtggcagagaaaccgtccctggctcagtccatctccaaaatc
ctctctaaaggaagttgtacaagtcgcaaggggctcaatggagcatgctcagtgcacgaa
tacaccggcagcttccagggccagagcgtacgctttaagatgacttctgtttgtggacat
gtgatgagtctggatttcatcggaaagtacaacaattgggacaaggtggacccggcagaa
ctcttcagcacagctcccacggaaaggaaggaggccaaccctaaactcaacatggtcaag
ttccttcaggttgaaggtagaggctgtgactatgtggttttatggctggactgtgataaa
gaaggcgagaacatctgttttgaggtactggatgccatccagccagtgatgaacaagggg
agttccatggatcagagtgtttaccgcgccaaattcagctccattaccgacactgacatc
tggaatgccatgaactgcctcggagagcccaaccgcaacgaggcgctgtcagtggatgct
cgacaggagctggacctgcgcattggctgtgcattcacccggttccagaccaagtatttt
cagggcaaatacggtaatctagactcttccttgatctcattcggaccatgccagaccccc
accctcggcttctgtgtggaacgccatgacaagatccagtcctttagaccagagacttac
tggatcctccaggcaaaggtgttcaaaggaaaggataacccactgatgctggactggaac
agggtgagggtcttcgacagggatgttggtcagatgtttgtcaatctggctaagacatcg
agggaggccaaggtggagtcggtgagtaagaaagagaaggccaagcagagaccccaggcc
ttgaacacagtggagatgttgcgagtggccagctctgctttaggcttcggtccccagcat
accatgcagattgcggagcgactgtatacacagggctacatcagctacccacgtactgag
acgacccactacccagagaacttcgatctgaaaggaacactgaagcagcaggccaacaat
ccctattgggcagaagaggtgaaggctctgctttcaactggactgaaccgacccaggaaa
ggatctgatgcaggagaccatccacccatcactccgatgcgtgctgcctccgagggggaa
ctgggcagtgatggctggcggctgtacgagtacatcacacggcatttcattgccacaatc
agtcaggactgcaagtacctacagaccacaatagacttcagcattggcccagaggccttc
tcatgtactggcaaaaccctgatctcaccaggttacacaacagtgatgccttggctgggc
atcccgctagaagagaccttgccagaatgtgagcgtggagacactttcacagtagatgag
atcaagctggtggaaaagcagaccagccccccggaatatctgactgaggccgaactcatc
acactcatggagaaacatggcgttggtactgatgccagcatccctgtccacatcaacaac
atctgccagaggaactatgtcacaatagagaatggacgcaagttgaagccaacaaacttg
ggcattgtcctggttcatggctactacaagatagatgcagagctggttttacccactata
cgcagcgcagtagagaagcaactgaaccttattgcacaaggtaaagccaacttccaacaa
gtccttcagcatacactggatatcttcaagaggaagtttcactactttgtggattctatc
actggtatggatgagttgatggaggtctccttttcccccattgctgcctcagggaagcca
ctgtcccgctgtggcaagtgccaccgcttcatgaagtacatccaggccaagcccagcagg
ctccactgctcccactgtgatgagacatacagtcttccacagaatggagccatcaagctg
tacaaggagctccgctgtccactggatgaatttgagctggtgctgtggacctctgggccc
cggggcaagagctacccactatgcccttactgctacagcaacccgcctttcagggacatg
aaaaaaggtatgggatgtaatgagtgtactcatccgtcctgtcagcactctctcaactct
ttgggcattggacagtgtgtggagtgtgatactggggttttggtgctggatcccacctct
ggaccaaaatggaagatggcctgtaataaatgcaacgtggtggtccacttctttgaacat
gcacacagagtgcaggttgctcaggagagctgtgatgcctgtgaggcctctctggttgca
gttgacttcaacaagactcgcactccacttcctgccggtgagacccaacacacaggctgc
gttttctgcgatccagttttccaggatctggtggagctcaaacatgccaccatgaggtac
cggggtggtggtgcgagaagaggaggacgaggacgaggccggggacgccgtggcaatccc
aaaaaacctaaggacaaaatggctgccttggctgcttactttgtatga
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