Hippoglossus hippoglossus (Atlantic halibut): 117767864
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Entry
117767864 CDS
T07778
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03022
Basal transcription factors
hhip03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117767864 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
117767864 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhip03021
]
117767864 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
hhip03400
]
117767864 (gtf2h2)
Transcription machinery [BR:
hhip03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117767864 (gtf2h2)
DNA repair and recombination proteins [BR:
hhip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117767864 (gtf2h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Motif
Other DBs
NCBI-GeneID:
117767864
NCBI-ProteinID:
XP_034451715
LinkDB
All DBs
Position
9:complement(26217759..26224812)
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AA seq
394 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLKATVEEILFQSKRKRLIESHGQVRLGMMRH
LYVVIDCSRSMEDHDLRPNRLTATLKLMEAFVDEYFDQNPISQMGIITTKNKRAEKLTDL
TGNPKKHISALKKAVDTVCVGEPSLYNSLNLAIQSLKHMPGHTSREILIILSSLTTCDPA
NIYELIKTLKSLKVRVSVIGLSAEVRVCTVLTRETGGLYHVILDESHFKELLIMHIKPPP
ASSSSECSLIRMGFPQHTIAALTDQDAKPSFSMSHLDSSSGPGLSLGGYFCPQCHAKYTE
LPVECKVCGLTLVSAPHLARSFHHLFPLQTFVESPVEELKGDRFCKACQGKLKDKSVFNC
PSCHSVFCLECDIFIHDSLHCCPCCAHCNIAPSS
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccagagagagcgaagcgctgggaaggaggctacgagaggacatgggag
gttctgaaggaggatgaatctggctcacttaaagccacagtggaagagatcctgttccag
tccaaaaggaaaaggctgattgaaagccatggacaagtgaggcttggaatgatgcgtcac
ctctatgtggtgattgactgttcaagaagtatggaagaccatgacttgagacctaaccgc
ctcaccgcgactctaaagctgatggaagcttttgtggatgagtatttcgaccaaaacccc
atcagtcagatgggcattatcaccacaaagaataaaagggctgagaagttgactgacctg
acaggaaacccgaagaaacacatttctgctctgaagaaagccgtggacactgtgtgtgtc
ggagagccgtccctgtacaactctctcaacctggccatacagtccctcaagcacatgcct
ggacacaccagccgggagatccttataatccttagcagcctcaccacatgtgacccagcc
aacatctatgaactcatcaagaccctgaagtctctgaaggtgcgggtgtcggtaatcggc
ctgtcggcagaggtccgggtgtgcacggtgttgaccagggagacgggcggcttataccac
gttatcctggacgagagtcacttcaaagagcttctgataatgcacatcaaaccgccccca
gccagctcctcatctgaatgctctttaatacgcatgggttttcctcagcacactatcgct
gctctgactgaccaggatgccaagccttcattcagcatgtctcatctggacagcagcagt
ggtcccggtctctctctgggagggtacttctgtccacagtgccatgccaagtacacagag
cttcctgtggagtgtaaagtctgtggtttgactctggtgtcagccccacatctcgccaga
tccttccaccacctcttccctctccagacctttgtagagagtcctgtggaggagctcaaa
ggagacaggttctgtaaagcttgtcaagggaagttaaaggataaaagtgtattcaactgt
ccatcctgtcacagtgtgttctgtctggagtgtgatatcttcattcatgactcactccac
tgctgcccctgctgtgctcactgtaacatcgccccctcaagctga
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