Hippoglossus hippoglossus (Atlantic halibut): 117767868
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Entry
117767868 CDS
T07778
Symbol
si:dkey-3h3.3
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117767868 (si:dkey-3h3.3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117767868 (si:dkey-3h3.3)
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117767868 (si:dkey-3h3.3)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117767868 (si:dkey-3h3.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-rbx1
zf-RING_4
zf-RING_10
KH_DTX3L
zf-RING_11
zf-C3HC4_4
DZR_2
Zn_ribbon_6
DUF1272
DZR
Motif
Other DBs
NCBI-GeneID:
117767868
NCBI-ProteinID:
XP_034451725
LinkDB
All DBs
Position
9:complement(28239767..28244121)
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AA seq
349 aa
AA seq
DB search
MDVSAVVMTYIQEKCAKELNKIQGNSFVFETQPEHSTVHNNPSGTVQVIIRPQGVSAHPV
HADYVRQRFITFYQRTASDLQVTSVPVSPHKHEDLQMTFPRILFKTSHGYPVTATGPFLH
IAQLKKFLSQNTQSSSKSPVNKGSTDTPSSRTRGPQPTQDKDPEDELCPICMEPIAIKEK
QTLQCKHSFCKDCLEKAYKYKPVCPTCGKVYGTLTGTQPDGGKMKVYRNDSSLPGYEKYG
TITIYYDIQSGIQEKEHPNPGQPFEGVLRMAYLPDSSEGRRILELLRRAFDQRLIFTVGR
STTTGRNNIVTWNDIHHKTSTHGGPTCYGYPDPDYLSRVGDELKLKGID
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatctgcggttgttatgacctacattcaggaaaaatgtgcaaaagaactcaac
aaaattcaagggaacagttttgtctttgaaacccagcctgaacacagcacagtgcacaat
aaccccagtggcacagtgcaggtgattataagaccacagggtgtctccgcacaccctgtt
catgctgattatgtcagacaaagattcatcacattctaccagagaactgcctctgacctg
caggtcacttctgtccccgtgagtccacataaacacgaagacctgcagatgacgtttccc
cgtatcctttttaaaaccagccacggatatccagtaacagctacagggccctttctgcac
attgctcaattgaagaagttcctttcacaaaatacacaaagttcaagcaagagtccagtg
aacaaaggttcaacagacactccaagcagtagaacccggggtcctcagcctacacaagac
aaagatcctgaagatgaattatgtccaatctgtatggaaccaatagcgattaaggagaag
caaaccctgcagtgcaagcattccttctgcaaagactgtttggaaaaagcttataaatat
aagcctgtatgccccacatgtggaaaggtatatggtactttgacagggacacaacctgat
ggaggcaaaatgaaagtctacagaaacgactcatctttacctggatatgagaaatatgga
acaattactatctactatgacattcaaagtggcatccaagagaaggagcatcctaatcct
ggtcagccatttgaaggtgtattgcgcatggcctatctccctgactcctcagagggcagg
aggatcctggagctgttgagacgtgcctttgaccagagactcatcttcactgtgggtcgc
tccaccaccactggcaggaacaacatagtcacatggaatgatattcaccacaaaacctca
acacacgggggaccaacttgctatggatacccagatccggattacctcagccgagttgga
gatgaactgaaactcaagggaattgactga
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