KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117767981
Entry
117767981         CDS       T07778                                 
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8
  KO
K10570  DNA excision repair protein ERCC-8
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03420  Nucleotide excision repair
hhip04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117767981 (ercc8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    117767981 (ercc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hhip04121]
    117767981 (ercc8)
   03400 DNA repair and recombination proteins [BR:hhip03400]
    117767981 (ercc8)
Ubiquitin system [BR:hhip04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     117767981 (ercc8)
DNA repair and recombination proteins [BR:hhip03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      117767981 (ercc8)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st WD40_MABP1-WDR62_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EML WDR55 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd NBCH_WD40 ANAPC4_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_WDR19_1st WD_LRWD1 Beta-prop_RIG_1st Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 117767981
NCBI-ProteinID: XP_034451867
LinkDB
Position
9:10167993..10180731
AA seq 401 aa
MLGFLTARQTGLDDPLRLRRAESTRRVLGLELNPDRDVDRIHGNGINSIDIEAVEGRYML
SGGADGVIVIYDLENFSGKPQYTCKSVCTVGRSSRYVHKFSVETVQWYPYDTGMFVSSSF
DKTMKVWDTETLKPAEVFEFEGNVYSHHLSPIARKHSLIAVGTKEPKIQLCDLKSGSRIH
VLQGHRAEVLSVRWSPRYEHILATASADSKVKVWDVRRASGCLFTLDQHNGDKSKASSEA
VNTAHNGRVNGLCFTGDGLYILTTGTDDRMRLWNSATGENTLVNYGKVCNESRKKLQFTV
SRGCSPEFVFVPCGSSIAVYALHTGKLVTTLRGHYNNVDCCEFHPDYQELYSGGKDCNIL
AWVPVLHASAVEDESESTNTGAANPSSGNPAFQDAWSSDED
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgctggggtttctgacggcgaggcagacaggactggacgatcctctgagactgcgacga
gctgagtccacgagaagggtccttggtctggagttgaatcctgacagagatgtggaccga
atccatggaaatggcatcaactctattgacattgaagcagtagagggcagatacatgtta
tctggaggtgcagatggagtgatcgttatctacgacctggagaacttcagtgggaaacca
cagtacacctgcaagtccgtctgtacagtcggcaggtctagcaggtatgtccacaaattc
agtgtcgagacagttcagtggtatccttacgacacaggcatgtttgtctccagctccttt
gataagaccatgaaggtctgggacacagagacactgaagcctgctgaggtctttgagttt
gagggcaacgtctacagccaccatctatcccccatcgccaggaagcacagtctcatcgca
gttggcaccaaagaacctaaaatccagctgtgtgacctgaagtctggttcacggattcac
gttcttcagggtcacagagcagaggtactgtctgtgcggtggtcacccagatatgagcac
atcttggccactgccagtgcagacagcaaggtgaaggtatgggatgtacgtcgggcctct
ggttgtctcttcactttggaccagcacaacggagacaagtcgaaagcctcctctgaggca
gtaaacacagcccataatggcagagtgaatggcctgtgcttcactggggacggcctctac
atcctcacaactgggactgatgatcgcatgagactgtggaacagtgccaccggggaaaac
acgctggtgaactatggaaaagtctgcaatgagagtcgtaaaaagctccagttcaccgtg
tcgcgaggctgcagcccagagtttgtgtttgtgccatgcggcagctccatcgcagtctat
gccctccacacaggaaagctggtcaccacgctcaggggtcactacaacaacgtcgactgc
tgcgagttccacccagactaccaggagctgtacagtggaggtaaagactgtaacatcctg
gcttgggttcctgttcttcacgcctcagctgtggaggacgagtcagagtcaacaaatacg
ggagctgccaacccgtcttcagggaaccctgcctttcaggatgcatggagcagtgatgaa
gattga

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