Hippoglossus hippoglossus (Atlantic halibut): 117768017
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Entry
117768017 CDS
T07778
Symbol
pcna
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03030
DNA replication
hhip03410
Base excision repair
hhip03420
Nucleotide excision repair
hhip03430
Mismatch repair
hhip04110
Cell cycle
hhip04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117768017 (pcna)
03410 Base excision repair
117768017 (pcna)
03420 Nucleotide excision repair
117768017 (pcna)
03430 Mismatch repair
117768017 (pcna)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117768017 (pcna)
09144 Cellular community - eukaryotes
04530 Tight junction
117768017 (pcna)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhip03032
]
117768017 (pcna)
03400 DNA repair and recombination proteins [BR:
hhip03400
]
117768017 (pcna)
DNA replication proteins [BR:
hhip03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
117768017 (pcna)
DNA repair and recombination proteins [BR:
hhip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
117768017 (pcna)
MMR (mismatch excision repair)
Other MMR factors
117768017 (pcna)
TLS (translesion DNA synthesis) factors
Other TLS factors
117768017 (pcna)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Hus1
Herpes_UL42
Motif
Other DBs
NCBI-GeneID:
117768017
NCBI-ProteinID:
XP_034451945
LinkDB
All DBs
Position
9:complement(7709708..7713256)
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AA seq
260 aa
AA seq
DB search
MFEARLVQGSILKKVLEALKDLITEACWDVSSSGISLQSMDSSHVSLVQLTLRHDGFDSY
RCDRNLAMGVNLSSMSKILKCAGNEDIITLRAEDNADTLALVFETLNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSQIGDAVMISCAKDGVKFSASGELGTGNV
KLSQTSNVDKEDEAVTIEMNEPVQLIFALNYLNFFTKATPLSKTVTLSMSADIPLVVEYK
IADMGHVKYYLAPKIDEEAS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaggctcgcctggtgcagggctccatcctgaagaaggtgctggaggctctgaag
gacctgatcaccgaggcctgctgggacgtcagctcgtccggcatctccctgcagagcatg
gactcctctcacgtgtccctggtgcagctcacactccggcacgacggcttcgactcgtac
cgctgcgacaggaacctggcgatgggggtgaacctcagcagtatgtcaaagatcctgaag
tgtgctggaaacgaggacatcatcaccctccgagcagaagacaatgcagacacactcgcc
ctcgtgtttgagacactcaaccaggagaaagtctcagattatgagatgaagttgatggac
ctggatgtggagcagctgggtattccagagcaggagtacagctgcgtggtgaagatgccc
tccggggagttcgccagaatctgcagagatctctcccagatcggcgacgccgtcatgatc
tcctgtgccaaggatggagtcaagttctccgcttcaggagagctgggaacaggaaacgtc
aaactgtcccagaccagcaatgtagacaaagaggacgaagcggtgaccatcgagatgaac
gagcccgtccagctgatctttgccctcaactacctgaacttcttcaccaaggccacgccg
ctgtccaagacagtcaccctcagcatgtccgccgacatccccctggtggtggagtacaag
attgctgacatgggacacgtcaaatactacctggcgccgaagatcgatgaagaggcttca
tag
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