Hippoglossus hippoglossus (Atlantic halibut): 117768033
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Entry
117768033 CDS
T07778
Name
(RefSeq) DNA repair protein XRCC4-like
KO
K10886
DNA-repair protein XRCC4
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
117768033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhip03400
]
117768033
DNA repair and recombination proteins [BR:
hhip03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
117768033
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GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
DUF5817_CT
Peptidase_U4
ZapB
Motif
Other DBs
NCBI-GeneID:
117768033
NCBI-ProteinID:
XP_034451968
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Position
9:complement(17123141..17147554)
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AA seq
293 aa
AA seq
DB search
MSGTVRQITITTDPSTPYFLRVDWAEDLGAGFTLALTDGSSAWIGEVSEDEVTKEASELG
VTRENYVKDLLLALTRSGKGRGGRRRGSDKKAYSFHLTPDHCHLSYQKFCDDITVDLGLV
ELQPAPDPLELNREMIGQSLKRSTDLQSENCRLLEENCGLKQEHHRILTELEKHVQDKKM
MEKKLYSRFVLVLNEKKAKIRGLQDTVHQLQQTADKRHSDDEATVDEDGSQNRGEETVPS
SHPSQEQTILITGRNLVCHGVTVDHTFSDNEDVQPRRRRRLLRAPSTESSEQE
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacagtccgccagatcacaataaccactgatccaagtaccccctacttcctg
cgagtggactgggcagaggacctgggtgctggatttacattagctctcactgatggcagc
tcggcgtggatcggagaagtttcagaagatgaggtgacaaaggaagccagtgaactggga
gtcacaagagaaaactatgtgaaggatcttcttctagcactaacaaggagtggtaaagga
agaggaggacgacggagagggagcgacaagaaggcgtattctttccacctgactccagat
cactgtcatctctcatatcagaagttctgtgatgacatcacggtggacttgggcttggtg
gagctccaaccggctccagaccctctagagctgaaccgggagatgattggccagtccctg
aagcgcagcacagatctgcagtcagaaaactgccggctactggaggagaactgtggactg
aaacaggagcaccatcgaatactcacagagctggagaagcatgttcaggataagaagatg
atggagaagaagctttactcacgttttgtcctggtgctgaatgagaagaaggcgaagatc
cggggcctgcaggacaccgtccaccagctccaacagaccgctgacaagcggcacagtgac
gatgaagcaactgtggatgaagatggcagtcagaacagaggagaggagaccgttccgagc
agccatccatctcaggagcaaaccatcttaatcacaggtcgtaatcttgtgtgccacggc
gtcactgtggaccacacgttttctgataacgaagacgtacaaccgagacggaggcgcagg
ttacttcgcgctccaagcaccgagtcctctgagcaggaataa
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