Hippoglossus hippoglossus (Atlantic halibut): 117768078
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Entry
117768078 CDS
T07778
Symbol
ube3b
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117768078 (ube3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117768078 (ube3b)
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117768078 (ube3b)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
HECT type E3
117768078 (ube3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
Fn1_3
Motif
Other DBs
NCBI-GeneID:
117768078
NCBI-ProteinID:
XP_034452051
LinkDB
All DBs
Position
9:18219583..18226485
Genome browser
AA seq
1068 aa
AA seq
DB search
MFSVPQISKSEFLDKARQAREERRGQKDKEKSATNIQALVRRFLCRCRLQKQIRKEVDDY
FQASEPGTPKRNALSIFKISRKLLFVYRLEDKMRFEKLCRAILASMEVENDPKVWYVSLA
LSKDLTIPWIKQVKDVLWTCCQLLKNLKPDILQDNKLVTLYLTMLVTFTDTSTWRIVRGK
GEALRPALMRICENIMGHLNQKGFYSILQILLTNGLARSKPSLSKGTLTAIFTLSLRPVI
AAHFSDNLLRSFLIHIMSVPAVVTHLNGLTPECMVSIQTHGLLRKFILFLSREEQCSDIC
VCLEGSHTLCLLGNLIHLGFLNEKVLEEEAGHFVKDLTDMLSYCQRYVSQKKSNLTHWHP
VLGWFSQTVDYGLNESMPLVTKQLQYLWGVAVIRTLFSDVLSKKLESQEPTPPPPQPSTS
QNNLPVKNLFKRAFQKSASVRNILKPVGGKRVDSAEVQKVCSICVLYQTALSTLTQIRLQ
ILTGLTHLDDLLPKLWAFICELGPQGGLKLFMECLNNDTEESKQLLAMLMLFCDCSRHLI
TILDDIEVYEEQTSFKIEELITISSFLNTFVFKMVWDGILENAKGEKLELFHSVHGWLMV
LYERDCRRKFTPDDHWLRKDLKPSLLFQELEKGKKRAQLLLQYIPHVVPHKNRVLLFRNI
VTKEKESLGLVETSSASPHVTHITIRRSRMLEDGYDQLRRLPANSIKGVIRVKFVNDLGV
DEAGIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPTSYIHENHLQLFEFVGK
MLGKAVYEGIVVDVPFASFFLSQVLGHHHSTFYSSIDELPSLDSEFYKNLTSIKRYDGDV
GDLGLTLSYDEDVMGQLVCHELIPGGKSMIVTNENKISYIHLMAHFRMHTQIKEQTAAFI
RGFRSIINPEWLHMFSTPEVQRLVSGDNAEIDLDDLKKHTVYYGGFHSSHRVIIWLWDIM
SSDFNSDERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFT
IRKKEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgtacctcaaatctccaagtccgagttcctggacaaagccaggcaggccagg
gaggagaggagggggcagaaggacaaggagaagtcggccaccaacatccaggctctggtc
cggaggtttctctgtcgctgcagactccagaagcaaataaggaaagaggtggatgactat
tttcaagcttctgaacccgggacgccgaaacgaaatgcactttcaattttcaaaatttcc
cggaaattactttttgtatatcgcctggaggataagatgaggttcgagaagctttgtcgt
gctattctggccagcatggaggttgaaaatgatcctaaagtctggtacgtgtccttggct
ctttccaaagacctcaccatcccctggatcaagcaggtcaaagatgtgctgtggacctgc
tgtcagctactgaaaaacttaaagcctgacattcttcaggacaataaactggtaacgctg
tacctcaccatgctggtgacctttacggacacttccacctggcggatagtccgaggaaag
ggagaagctctcagacctgctttgatgaggatctgtgaaaatatcatggggcatctgaat
caaaagggattttattcaatacttcagatcttgctgaccaatggcttagctcgttctaaa
ccgtctctgtccaaaggcactctaacagctatcttcaccttatcattaaggccagtcatt
gcggctcacttctcagataacctgctgagatcattcctcatccacatcatgtcagttcca
gctgtcgtgacccacctcaacgggctcactccagagtgcatggtatctatccagacgcac
ggcctcctgcggaagttcatcttgtttctcagccgagaagagcagtgttcagacatctgt
gtgtgtctggagggcagccacacgctctgcttacttggcaacctaattcacttgggtttc
ctcaatgagaaagtccttgaagaggaggccggtcatttcgtgaaggacctgactgacatg
ttgtcttactgccagagatatgtgtcccaaaagaagtccaacctcacccactggcacccc
gtcctgggctggttctcacaaactgtagattacggcctgaacgagtcaatgccactagtc
actaaacagcttcagtacctgtggggtgttgctgtcattcgaacgctctttagtgacgtc
ctctctaaaaagctagagagtcaggagcccacccccccgcctccgcagccgagcacatca
caaaacaatctaccagttaaaaacctcttcaagcgagcgtttcagaagtctgcctctgtg
agaaacatccttaaaccagtcggagggaagcgagtcgactcggctgaagtccagaaagtg
tgcagcatctgtgtgctctaccagactgctctgtctacactgacacaaatacgcctccag
atactcaccggtctgacacatcttgatgaccttttgcccaaactgtgggccttcatctgt
gagctgggtcctcagggaggcctcaaactcttcatggagtgtctgaacaatgacaccgaa
gagtccaagcagctcttagctatgctcatgctgttctgtgactgttcacggcacctcatc
acaattctggatgacattgaagtctatgaagaacaaacatctttcaagatcgaggaactc
atcacgatctcctcatttctgaacacatttgtgttcaagatggtgtgggatgggatctta
gaaaatgcaaagggagagaaactggagttgttccacagtgttcacggctggctgatggtg
ctttacgaacgagactgcaggcgaaagtttacccccgatgaccactggctacgcaaggac
ctaaagcccagcctgttgttccaagagctggagaagggaaagaaaagagcccagctgtta
ctgcagtacatcccacacgttgttccacataaaaacagggtgctgctgttcaggaacatc
gtaacaaaggaaaaggaaagtttaggattggtggaaacaagctccgcttctccacacgtc
acccatattaccatccgtcgctcgcggatgttagaggatggatatgatcagctccgtcgg
ctgccagcgaattctataaaaggcgtcattcgcgtgaagtttgtgaatgacttgggagtc
gatgaggctggtatcgaccaggatggtgtcttcaaagaatttctagaggagatcattaag
aaagtgttcaatcctgctctcaacctgttcaagaccaccagtggaaatgaaaggctttat
ccttcgcccacatcttacatccacgagaaccatttgcagctgtttgagtttgtgggaaag
atgctcgggaaagctgtctacgagggcattgtggtggacgtcccgtttgcctccttcttc
ctcagtcaagtcttgggccaccaccacagcactttctatagctccattgatgagcttcct
tctctggactcagagttttacaagaacctcacttccatcaagcgctatgatggagatgta
ggggatctaggcctgacgttatcctacgatgaggatgtcatggggcagcttgtttgtcat
gagctgatacctggggggaaatccatgatcgtcaccaatgaaaacaagatcagctacatc
cacctcatggctcacttccggatgcacacgcagattaaagagcaaaccgcagctttcatt
cggggcttccgcagcatcattaaccccgagtggctgcacatgttctccacgcctgaggtt
cagcgccttgtctcgggagacaatgccgagattgatctagatgacctcaagaaacacaca
gtgtattatggaggatttcacagcagccatcgtgtcatcatctggctgtgggacatcatg
tccagtgacttcaactctgacgagagggctatgttccttaaatttgttaccagctgttca
aggcctcctcttctcggttttgcctacctcaaaccacctttctccatccgctgtgtggaa
gtttcagatgatcaggacactggagacacccttggcagtgttctgagggggtttttcact
atccgcaagaaggaacccggtggtcgacttcccacttcgtcaacatgcttcaacctgctc
aagctgcctaactacagcaagaagagcatcctgcgtgacaagctgcgctatgctatcagt
atgaatacaggctttgagctgtcctaa
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integrated database retrieval system
