Hippoglossus hippoglossus (Atlantic halibut): 117768092
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Entry
117768092 CDS
T07778
Symbol
tars1
Name
(RefSeq) LOW QUALITY PROTEIN: threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117768092 (tars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hhip01007
]
117768092 (tars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhip03016
]
117768092 (tars1)
Enzymes [BR:
hhip01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
117768092 (tars1)
Amino acid related enzymes [BR:
hhip01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
117768092 (tars1)
Transfer RNA biogenesis [BR:
hhip03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117768092 (tars1)
Prokaryotic type
117768092 (tars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
117768092
NCBI-ProteinID:
XP_034452068
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All DBs
Position
9:5568265..5585368
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AA seq
724 aa
AA seq
DB search
MAEQAVEEKMSQLKVDGGKKGGTQSGKDGAKKKTKGGAGDAGGKAEMSPPPQYIDERLAL
YAKLKTEHEALMAERAANNSRAIKVTLPDGKVVEAESWKTTPYQVACGISQGLADNTVIA
KVNQNVWDLDRPLEEDCSLQLLKFDDEEAQAVYWHSSAHILGEAMERVYGGCLCYGPPIE
NGFYYDMFLESTEGVSSNDFPGLENLCKKIIKEKQPFERLEIKKETLLEMFKYNKFKCRI
LNEKVTTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSATYWEGKADMETLQRIYG
ISFPDPKMLKEWEKFQEEAKNRDHRKLGREQDLFFFHDLSPGSCFFLPKGTFIYNTLIEF
IRSEYRKRGFQEVVTPNIYNSKLWQTSGHWQHYSENMFSFEVEKETFALKPMNCPGHCLM
FDHRPRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCSMDQIEEEIKGC
LDFLRTVYEVFGFTFKLNLSTRPEKFLGDPEVWDQAEKQLEGSLIEFGEKWVLNAGDGAF
YGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLSFVSHDGDDKKRPVMIHRAILGSVER
MIAILTENYGGKWPLWLSPRQVMVVPVGPTCEEYAQKVKQDFHIGGFMTDVDLDPSCTLN
KKIRNAQLAQYNFILVVGEKEKTSNTVNVRTRDNKVHGERSVEECIERLKQLKTSRSQNA
EEDF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacaggcagtcgaggagaagatgagccagctgaaggtggacggagggaagaag
ggaggaacccaaagtggtaaagatggagcaaagaagaagactaaaggtggtgctggagac
gctggaggcaaggccgagatgtcaccaccacctcagtacatagatgagcgtcttgctttg
tacgccaagctgaaaaccgagcacgaagccctgatggcggagagggcggcgaacaatagt
cgagcgatcaaggtgaccttgcccgacggaaaggtggtggaggccgagtcctggaagacc
acaccatatcaggtggcctgtggaatcagtcaaggcctcgctgacaacacagtcattgca
aaagtgaaccagaacgtgtgggacctggaccgacctctggaagaggactgcagccttcag
ttgctcaagttcgatgatgaggaagctcaagctgtttactggcactccagcgcccacatc
ctgggtgaagccatggagagggtgtacggaggctgcctctgctacggcccccccatcgag
aacggcttctactacgacatgttcctggagagcactgagggtgtatcgagcaatgacttc
ccgggtctggaaaacttgtgcaaaaaaatcatcaaggagaagcagccgtttgagaggctg
gagataaagaaggaaactttgttggagatgttcaagtacaacaagtttaagtgccgcatc
ctgaatgagaaggtcaccactccgaccaccacagtttacaggtgcggtcccttaattgac
ttgtgtcgggggccccatgtgagacacactgggaaaatcaaggcactaaagatccacaag
aattcagctacatactgggagggaaaggcggacatggaaaccctccagaggatctatgga
atctccttccctgaccccaaaatgctcaaagagtgggagaagtttcaggaggaggccaag
aacagagatcaccgcaaactgggccgggagcaggacctgttcttcttccatgacctgagt
ccagggagctgcttcttcctgccaaaggggacattcatctacaacaccctgattgagttc
atcagaagtgaatacaggaagaggggtttccaggaggtggtgacacccaatatctacaac
agcaaactgtggcagacctctggccactggcagcactacagcgagaacatgttttccttc
gaggtggagaaggagaccttcgccctcaaacccatgaactgccccggacactgtctgatg
tttgatcaccggccgcgctcctggagagagttgcccctgcgcatggccgactttggcgtc
ctgcacaggaatgagctgtcaggggccctgaccggcctcactcgagttcgccgcttccag
caggacgatgctcacatcttctgctccatggaccagattgaggaggagatcaagggctgc
ctggacttcctgcggactgtgtatgaagtgtttggcttcactttcaaactcaacctctcc
acgaggccagagaagttcctgggggacccggaggtgtgggaccaagcagagaagcaactg
gagggcagcttgattgaatttggggagaagtgggttctcaacgcaggtgacggagctttc
tacggaccaaagatcgacattcagatcaaggacgccatcggccgctaccatcaatgtgcc
acaattcagctggatttccagctcccgatccgctttaacctcagctttgtcagccatgat
ggcgacgacaagaagaggccggtgatgatccacagagcgatcctgggatctgtggagagg
atgatcgctattctgactgaaaactacggaggcaaatggcctctgtggctctctcctcgt
caggtgatggttgttcctgtgggaccgacctgtgaggagtacgctcagaaggtgaagcag
gacttccacattggcggcttcatgaccgacgtggatctcgaccccagctgcactctgaac
aaaaagatcaggaacgcacagttggcccagtacaacttcatcctggtggtgggagagaag
gagaagacgagcaacaccgtgaatgtccgcactcgggacaacaaagtccacggcgagcgc
agcgtggaggagtgcatcgagcgtctgaagcagctcaagacatccaggagtcagaacgcc
gaggaggatttctga
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