Hippoglossus hippoglossus (Atlantic halibut): 117768274
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Entry
117768274 CDS
T07778
Symbol
utp15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117768274 (utp15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hhip03009
]
117768274 (utp15)
Ribosome biogenesis [BR:
hhip03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117768274 (utp15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_SPT8
NBCH_WD40
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_Vps41
WD40_like
Beta-prop_IFT122_2nd
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
KNTC1_N
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
117768274
NCBI-ProteinID:
XP_034452388
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Position
9:complement(7165641..7170709)
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AA seq
524 aa
AA seq
DB search
MASFKPTKVQIYPKLGEKVTQDTLYWKNYKAPVQIKEFGAITNIDVSPVAPHNFAVTAFT
RIHIYGAFSQEPVKTYTRFKDTAYCGRFRADGQLLVAGCEDSVVRLFDVSGKVALRMFKG
HTKAVHVTDFTSDRYQILTGSDDYTCRLWDMPNTTELNNYQEHTDYIRCGVTSKLNRDLF
ITGSYDHTLKVFDARMEKSVMTMDHGQPVESLLLYPSEGLLVSAGGRYVKIWDLLKGGQP
LVSLKNHHKTVTCLCLSSNGQRLLSGSLDRHVKVYSTTNYKVVHNFDYAASILSLALAPD
DESIVVGMTNGILSMKHRKNPEESKESIQQRRRPSYRFFVKGKNYVPKQDDYLVSKPVKQ
HLAKYDKQLKKFNVSQALDTALETWVRFRKPEVTVAVIKELDRRGTLKNALAGRDEQGLS
QLLNFLVGNLVDPRFAPVLVTTAEMILDIYQSVIGQSPVVDRQLLRLQDLLDREIDYQQE
LLEVLGMLDTMFASSLPRKQVPCSAVSRSNGLAQGEAGTQLPAT
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttaaacctacgaaggtccaaatctatcccaaacttggggagaaagtcaca
caagacacactctactggaaaaactacaaggctccggtccagataaaagaatttggagcg
atcacaaacatagatgtctcccccgtggcgccgcacaactttgctgtgacagcgttcaca
agaatccacatttatggggcgttctcccaggagcctgtaaagacatacacacggttcaaa
gacacagcttactgtgggaggttcagggccgatggtcagctactcgtggcgggatgtgag
gactctgtggtccggctgtttgacgtcagtggcaaggtggcactcaggatgtttaaaggg
cacacaaaggccgtacatgtaacagacttcacctcagaccgttaccagatcctcacgggg
tccgacgactacacctgtcgactctgggacatgccgaacaccacagagctcaacaactac
caagaacacacagattacatccgctgtggagtcaccagcaagctcaacagagatctcttc
attactggatcatacgaccacacactgaaagtatttgatgccagaatggaaaagagtgtg
atgaccatggaccacggccagccagtggagagtctccttctttatccctctgagggtctc
ctcgtctctgcaggtggacgttatgtgaaaatttgggatcttctaaaaggaggtcagcct
cttgtctccctgaagaaccatcacaaaactgtcacctgtttgtgcctcagcagcaatgga
cagagactcctgtcgggttctctggacaggcacgtgaaggtgtacagcacaaccaactat
aaagtggttcacaactttgactatgctgcctccatcctcagtctggctttagctcctgat
gatgagtccattgtcgtgggtatgaccaacggtattctgagtatgaaacacagaaagaat
cctgaagagtcgaaagaaagcatccaacagaggcgacgaccgtcgtatcgtttttttgtg
aaggggaagaactatgtccctaaacaggatgattatctcgtcagtaagccagtgaaacag
catttggccaaatacgacaagcagctcaagaaattcaatgtatctcaggctttggataca
gctctcgagacatgggtaagattcagaaaacctgaggtcacagtcgctgttataaaggag
ctggatcgaagaggaacgctgaagaacgctctggcaggaagggacgaacagggtctctct
caactgctcaacttcctcgtagggaacttggttgaccctagatttgctcctgtgcttgta
acgacggctgagatgatcttggacatctatcagtcagtaatcggtcagtcgccagtcgtg
gaccgacaactgctacgtctgcaggacctgcttgacagggagattgactaccagcaggaa
ctgctggaggtgctgggcatgttggacacaatgtttgcctcctccctcccaaggaagcaa
gtgccctgctctgccgtcagcaggtctaatggtctggctcagggagaagcaggaacacag
cttccggccacctga
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