Hippoglossus hippoglossus (Atlantic halibut): 117768294
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Entry
117768294 CDS
T07778
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04310
Wnt signaling pathway
hhip04520
Adherens junction
hhip04916
Melanogenesis
hhip05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117768294 (lef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117768294 (lef1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
117768294 (lef1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117768294 (lef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117768294 (lef1)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
117768294 (lef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117768294
NCBI-ProteinID:
XP_034452455
LinkDB
All DBs
Position
1:complement(19870653..19929439)
Genome browser
AA seq
378 aa
AA seq
DB search
MPQLSGGGGGGGDPELCATDEMIPFKDEGDPHKEQIFAELSHSEEEGDLADIKSSLVHES
ESSPNSNSHDAGRHSQDSYHEKHRDHLEDGKHHDLYGKSHPYSGYPGYIMMSNMNDSYMN
NGSLSPPMARTSNKVPVVQPSHAVHPLTPLITYSDEHFALGSHSGHHHQDGNNKQGMQRH
HQGPDMTNFYSLSPGGVGQITPPLGWFSHHMVPGPPGPHATGIPHPAIVNPQVKHEPPHE
TDIMHMKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRR
WHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKMQETTTGGKRNNFS
TCKAKAAATGPLLEMEAC
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagttatcaggcggcggcggcggcggaggagacccggagctgtgcgccaccgac
gagatgatccccttcaaagacgagggggacccgcacaaggagcagatcttcgccgagctc
agccactcggaggaggagggagacctggccgacatcaagtcgtccctggtgcacgagtcg
gagagcagccccaacagcaacagccacgacgcaggtagacattcccaagattcatatcac
gaaaaacacagagaccatctggaagatggaaaacatcatgacttgtacggcaaaagccat
ccgtactcgggctacccaggctacatcatgatgagtaacatgaacgactcctacatgaac
aatggctccctctcaccacccatggccagaacgtccaacaaagtccctgtggtgcagccg
tcccatgcagtccacccactcaccccgctgatcacgtacagtgacgagcacttcgctcta
ggatctcactctggacatcatcatcaggatggcaacaacaaacaaggaatgcaaaggcat
caccagggcccggacatgaccaacttctactccctatcacctggaggagtgggacagatc
acgccaccactgggatggttctcacaccacatggtgcctggccccccaggccctcacgcc
acagggatcccccacccggccatcgtcaacccgcaggtcaaacacgagccaccgcatgaa
acagacatcatgcacatgaaaccccagcatgagcagagaaaggagcaggagcccaaaaga
ccgcacatcaagaagccactaaacgccttcatgctctacatgaaagagatgcgtgcgaat
gtggtcgccgagtgcacgctgaaggagagcgcagccatcaaccagatcctgggacgaagg
tggcatgctttatctcgggaagagcaagctaagtattatgagctagcccgcaaggaacgg
cagctccacatgcagctctacccaggctggtccgctcgagacaattatggaaagaagaag
aagcggaagagggagaagatgcaggaaacgaccacaggaggaaaacggaacaatttctcc
acatgcaaagcgaaggcagcagctacgggccctcttctagagatggaggcctgttag
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