KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117768367
Entry
117768367         CDS       T07778                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
  KO
K13178  ATP-dependent RNA helicase DDX17 [EC:5.6.2.7]
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hhip03041]
    117768367
Enzymes [BR:hhip01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     117768367
Spliceosome [BR:hhip03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    117768367
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Helicase_C_2 Cas3-like_C_2
Other DBs
NCBI-GeneID: 117768367
NCBI-ProteinID: XP_034452543
LinkDB
Position
1:complement(7539205..7548182)
AA seq 653 aa
MRGGSSYGDRGRDRGRDRPRFGATGGRGGPPPMKFGNPGERLRKKKWNMDELPKFEKNFY
TEHPEIQHISQYEMEEYRRKKEITIRGTGCPKAVTAFHQAQFPQYVMDVLMQQNFTEPTA
IQSQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQAYLERGDGPICLVLAPTREL
AQQVQQVAFDYGKTSRIKTTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEGGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKDVRQLAEDFLRDSVQ
INVGALELSANHNILQIVDVCMETEKDHKLFQLMEEIMAEKENKTIIFVETKKRCDDLTR
RMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDIKFVINYDYP
NSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLAEARQAINPKLLQFVESGR
GGGGGGGRMRYRGGNSSNPNLMFHDECERRMRPGGGGGGSSSKDGRSGFSRDNRNSRDGD
HSNSSSSSSFRDRGDRRNSFNSGSEQYQSYSGSSGYNSRPNTQSAGSGSQDQSGQPQGQF
GQPPPPPVPTGGPLPLMAQQFALQQPPLLGFMGQPPYPFASPPPPPGPQPPRK
NT seq 1962 nt   +upstreamnt  +downstreamnt
atgagaggaggctcgtcttatggagacaggggcagagaccgcgggcgagacaggccacgg
tttggggccacgggtggtcgaggtggacccccacccatgaagtttgggaatccaggagag
cgtctccgcaagaagaagtggaacatggacgagctgccaaaatttgagaagaatttctat
actgaacaccctgagatccaacacattagtcagtatgaaatggaagagtatcgcaggaag
aaggagatcaccatcagaggcactggctgtccaaaagctgtcaccgctttccaccaggcg
cagtttcctcagtatgtgatggatgtgctgatgcagcagaactttacggagcccacagcg
atccagtctcagggcttccctttggccctgagcggccgggacatggtgggaatcgctcag
actggctctggaaagacactggcttatctcctccctgctattgtgcacatcaaccatcag
gcctatctggagaggggagatggaccgatttgtctggtgctggccccgaccagagagctg
gctcagcaggtccagcaggttgcattcgactatggcaagacctctcgcatcaaaaccacc
tgtgtctatggcggagcacccaaaggaccacagataagagacctcgagaggggtgttgag
atctgcatcgccacacctggccgtctcattgacttcctggagggggggaagactaacctg
cgtcgctgcacctacctcgtgctggatgaggcggaccgcatgttggacatgggctttgag
ccacaaattcgcaagatagttgatcaaatcaggcccgacagacagacgctgatgtggagt
gcgacatggccgaaggacgttcggcagcttgctgaggacttcctgagggactctgtgcag
attaatgttggcgctctggaactcagcgccaaccacaacatcctgcagatagttgatgtc
tgcatggagactgaaaaggaccacaaactttttcagctcatggaggaaattatggctgaa
aaggaaaacaaaaccatcatctttgtggagaccaagaagcgctgtgatgatctcaccagg
agaatgaggcgggacggatggccagctatgtgtattcatggagacaagagccagccagaa
agagattgggttctcacagaatttcgtagtggaaaagctcccatactgatcgctactgat
gttgcctctcgtggtctggacgtggaagacatcaagttcgtcatcaactacgattaccca
aactcctctgaggattacgtccaccgcatcggacgtacagcccgcagtaccaacaagggc
actgcctacaccttcttcaccccggggaacctgcggcaggcccgagaccttgtgcgggtg
ttggcggaggcccgacaggccatcaacccaaaactgcttcaatttgtggaatcaggccgt
ggtggaggtggaggcggtggcagaatgcgttaccgcggcggcaactccagcaaccccaac
ctaatgttccacgacgagtgtgagcgccgcatgcgtccgggtggaggcggcggcggcagc
agcagcaaagatggacgcagcggtttcagtcgtgacaaccgcaacagccgtgatggagac
cactccaattcctcctcctcttcctccttcagggacagaggtgatcgcaggaacagcttc
aactcggggtcagagcagtaccagagttacagcggcagcagtggctacaactcccgtccc
aacacccaatcagcaggcagtggaagtcaggatcagtcaggtcagccgcaaggtcagttt
ggccagcctccccctcctcctgtgccaacaggggggccactgcccctcatggcgcagcag
tttgctctgcaacagcccccgctattgggcttcatggggcagccgccgtacccttttgcc
tctccgcctcctcctccaggccctcaaccgcccaggaagtag

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