Hippoglossus hippoglossus (Atlantic halibut): 117768367
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Entry
117768367 CDS
T07778
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhip03041
]
117768367
Enzymes [BR:
hhip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117768367
Spliceosome [BR:
hhip03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117768367
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
117768367
NCBI-ProteinID:
XP_034452543
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All DBs
Position
1:complement(7539205..7548182)
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AA seq
653 aa
AA seq
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MRGGSSYGDRGRDRGRDRPRFGATGGRGGPPPMKFGNPGERLRKKKWNMDELPKFEKNFY
TEHPEIQHISQYEMEEYRRKKEITIRGTGCPKAVTAFHQAQFPQYVMDVLMQQNFTEPTA
IQSQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQAYLERGDGPICLVLAPTREL
AQQVQQVAFDYGKTSRIKTTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEGGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKDVRQLAEDFLRDSVQ
INVGALELSANHNILQIVDVCMETEKDHKLFQLMEEIMAEKENKTIIFVETKKRCDDLTR
RMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDIKFVINYDYP
NSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLAEARQAINPKLLQFVESGR
GGGGGGGRMRYRGGNSSNPNLMFHDECERRMRPGGGGGGSSSKDGRSGFSRDNRNSRDGD
HSNSSSSSSFRDRGDRRNSFNSGSEQYQSYSGSSGYNSRPNTQSAGSGSQDQSGQPQGQF
GQPPPPPVPTGGPLPLMAQQFALQQPPLLGFMGQPPYPFASPPPPPGPQPPRK
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaggctcgtcttatggagacaggggcagagaccgcgggcgagacaggccacgg
tttggggccacgggtggtcgaggtggacccccacccatgaagtttgggaatccaggagag
cgtctccgcaagaagaagtggaacatggacgagctgccaaaatttgagaagaatttctat
actgaacaccctgagatccaacacattagtcagtatgaaatggaagagtatcgcaggaag
aaggagatcaccatcagaggcactggctgtccaaaagctgtcaccgctttccaccaggcg
cagtttcctcagtatgtgatggatgtgctgatgcagcagaactttacggagcccacagcg
atccagtctcagggcttccctttggccctgagcggccgggacatggtgggaatcgctcag
actggctctggaaagacactggcttatctcctccctgctattgtgcacatcaaccatcag
gcctatctggagaggggagatggaccgatttgtctggtgctggccccgaccagagagctg
gctcagcaggtccagcaggttgcattcgactatggcaagacctctcgcatcaaaaccacc
tgtgtctatggcggagcacccaaaggaccacagataagagacctcgagaggggtgttgag
atctgcatcgccacacctggccgtctcattgacttcctggagggggggaagactaacctg
cgtcgctgcacctacctcgtgctggatgaggcggaccgcatgttggacatgggctttgag
ccacaaattcgcaagatagttgatcaaatcaggcccgacagacagacgctgatgtggagt
gcgacatggccgaaggacgttcggcagcttgctgaggacttcctgagggactctgtgcag
attaatgttggcgctctggaactcagcgccaaccacaacatcctgcagatagttgatgtc
tgcatggagactgaaaaggaccacaaactttttcagctcatggaggaaattatggctgaa
aaggaaaacaaaaccatcatctttgtggagaccaagaagcgctgtgatgatctcaccagg
agaatgaggcgggacggatggccagctatgtgtattcatggagacaagagccagccagaa
agagattgggttctcacagaatttcgtagtggaaaagctcccatactgatcgctactgat
gttgcctctcgtggtctggacgtggaagacatcaagttcgtcatcaactacgattaccca
aactcctctgaggattacgtccaccgcatcggacgtacagcccgcagtaccaacaagggc
actgcctacaccttcttcaccccggggaacctgcggcaggcccgagaccttgtgcgggtg
ttggcggaggcccgacaggccatcaacccaaaactgcttcaatttgtggaatcaggccgt
ggtggaggtggaggcggtggcagaatgcgttaccgcggcggcaactccagcaaccccaac
ctaatgttccacgacgagtgtgagcgccgcatgcgtccgggtggaggcggcggcggcagc
agcagcaaagatggacgcagcggtttcagtcgtgacaaccgcaacagccgtgatggagac
cactccaattcctcctcctcttcctccttcagggacagaggtgatcgcaggaacagcttc
aactcggggtcagagcagtaccagagttacagcggcagcagtggctacaactcccgtccc
aacacccaatcagcaggcagtggaagtcaggatcagtcaggtcagccgcaaggtcagttt
ggccagcctccccctcctcctgtgccaacaggggggccactgcccctcatggcgcagcag
tttgctctgcaacagcccccgctattgggcttcatggggcagccgccgtacccttttgcc
tctccgcctcctcctccaggccctcaaccgcccaggaagtag
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