Hippoglossus hippoglossus (Atlantic halibut): 117768444
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Entry
117768444 CDS
T07778
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117768444
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
117768444
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hira
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR35_TULP_N
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
HIRA_B
WD40_like
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
117768444
NCBI-ProteinID:
XP_034452679
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Position
9:complement(1247485..1258014)
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AA seq
1022 aa
AA seq
DB search
MKLLKPSWVSHNGKPIFSVDIHPDGTKFATGGQGEDSGKVMIWNMAPVLREEDEKNESIP
KMLCQMDNHLACVNCVRWSNNGLYLASGGDDKLVMVWRRAAFIGPSTVFGSSSKLANVEQ
WRCVTILRNHTGDVMDVAWSPHDVWLASCSVDNTIVIWNARKFPEMVTCLRGHTGLVKGL
TWDPVGKYIASQADDHSLKVWRTMDWQMEANITKPFNECGGTTHVLRLSWSPDGQYLVSA
HAMNNSGPTAQIVERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQKNGSSPKPSCPYCCC
AVGSKDRSLSVWLTSLKRPLVVIHDLFDKSIMDISWTLTGLGMLVCSMDGTVAYLDFSLD
ELGDPLSEEEKNSIHQNIYGKSLAITSTEAQLSTTIIENPEMLKYQQERQNSAQATAGPG
SAGPESSAPKLNSVMNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQLDTGDFSPAL
FNSVPILPSGSSMSNHLTPQLSSDSSPGQASSLGLRPGIDPMLTSPAAGGLKGLDDIKDG
VKSTLLLTSATKIEPMKALDSRFTERSKATPGITAVITSISGLVPQDRSQFKPKDGISVL
KEVKAKEDSSSDSEDKMATINKNLSFSKRKPELLMDGAEVVEKRKKGRPRKDKIAAPSAQ
PFAQVTPPAEREPSRVTAAPAPVAVLRLPTPKTQKSFSLQVSMEPSVFLEVENEVSVVAG
SKLSQLRCSRDGRDWNTLLPSSVVTAAGSSDVLAVACEDRMLSVFSSCGRRLLPAIQLGT
PVSALHCAAHFVMALTAGAALSVWDVQKQKALVKNESLRNILSGVDISVSQSLLTQQGVP
VIGLSNGKSYCFSSSLETWTLIADKGDSLVQCADFRSCLPSHDAPVTSGPLAVMQGRNLN
AGRLASRLSSTPHHLQQSMTLAFLENQLAAALTLQSAQEYRYWLLIYARFLVNEGSEFRL
RELCKELLGPVHKSAATSWEPTTLGLRKRELLREVLPVIGENLRFQRLFTEYQDQLELLR
NK
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctgaagccgagctgggtgagccacaacggcaaacccatattttcagtggac
attcatcctgatggcacaaagtttgcaactggtggacaaggggaagattctggaaaggtg
atgatctggaacatggcgccggtcctcagggaggaggacgagaagaacgaaagtattccc
aaaatgctttgccagatggacaatcacctagcgtgtgtgaactgtgtgcgctggtccaac
aatggactgtacctggcatcaggaggagacgacaagctggtcatggtgtggaggagagct
gcattcatcggtccgagcacagtgttcgggtcgagcagtaaactggccaacgtggagcag
tggaggtgtgtcaccatcctgaggaatcacaccggagatgtgatggacgtggcctggtct
cctcatgacgtgtggctggcctcctgcagcgtcgacaacaccatcgtcatctggaacgct
cgtaaattcccagagatggtcacatgtctgcggggacacactggactggtgaaaggcctg
acctgggacccggtggggaagtacatcgcctcccaggccgacgaccacagcctcaaagta
tggaggacgatggactggcagatggaggccaacatcaccaaacccttcaacgagtgcggc
gggacgacccacgtcctgcgtctgtcctggtccccggacggtcagtatctggtgtcggct
cacgccatgaacaactccggccccacggcccagatcgtggaaagggacggctggaagacc
aacatggacttcgtgggtcaccgcaaagctgtcaccgtggtgaaattcaacccaaagatc
tttaagaagaaacagaagaacggcagctccccaaaacccagctgtccgtactgctgctgc
gccgtcggcagcaaggaccggtcgctctcagtctggctgacctccctgaagcgccccctg
gtggtcattcacgatctcttcgataaatcgattatggacatctcctggactctgacgggt
ctggggatgttggtgtgttccatggacggcactgtggcctacctggacttctcactggat
gaactgggagacccgctgagcgaggaggagaagaacagcattcaccagaacatctacggg
aagagtctggctataaccagcaccgaggctcagctctccaccaccatcatcgagaaccct
gagatgctcaagtaccagcaggagcgacagaactcggcccaggccaccgcggggccgggc
agcgccgggcccgagtcctccgcccccaagctcaacagcgtgatgaacggagagtctctg
gaggacatcaggaagaaccttctgaagaaacaagtggagacgagaaccgcagacggcaga
agacggatcacgccgctgtgcatcgctcagctggacacgggggacttctcaccggctctg
ttcaacagcgtccccatcctgccctcgggctcctccatgtccaatcatctcacccctcag
ctcagctctgactccagcccaggacaggcctcctctctggggctgaggcccggcattgac
cccatgctcacctcgcctgcagccggcggcctcaagggcctggacgacatcaaagacggt
gtgaaatccactctgctgctcacttccgccaccaagattgagccgatgaaagctttggac
tccaggttcaccgagaggtcaaaggccacgccggggatcacggccgtcatcacctccatc
tctggcctcgtgcctcaagacaggtctcagttcaagcccaaagacggtatctctgtcctg
aaagaagtaaaagccaaagaagattccagcagcgacagcgaggacaagatggccaccatc
aacaaaaacctgtcgttcagcaagaggaagccggagctgctgatggacggagcagaggtg
gtggagaagaggaagaagggacggcccaggaaagacaaaatagccgctcccagtgcccaa
cccttcgctcaggtgactcctccagcggagcgggagccgagcagagtgacggctgctcca
gctcctgtcgctgttctcaggctcccgacgccaaaaacacagaaatccttcagtctgcag
gtgagcatggagccgtcggtgttcctggaggtggagaacgaggtgtcggtggtggccggt
tcgaagctcagtcagctgcgatgctccagagacggacgagactggaacacgctgctgccc
agctcagtggtcactgctgcaggaagcagtgacgtccttgccgtcgcctgcgaggacagg
atgttgtctgtgttctcgtcctgcggtcgacggctgcttcctgccatccagctgggaaca
ccggtgtccgctctgcactgcgcggcccacttcgtcatggctctgacggccggagcggcg
ctctccgtctgggacgttcagaaacagaaggcgctggtgaagaacgagtctctgaggaac
attttatctggtgttgacatctcggtgtctcagtccctgctgactcagcagggggtcccc
gtcatcggactctccaacgggaagtcgtactgcttcagctcctcgctggagacttggact
ctgatagcagataaaggagactcgctggttcagtgtgcagacttcaggagctgcctacct
tcccatgatgcacctgtgacctcggggccactggctgtaatgcagggacgcaacctcaat
gctggtcgtctggcgtcccgtctctcctccacgcctcaccacctgcagcagagcatgaca
ctggccttcctagagaaccagctggcggcggctctgactctgcagtcggcgcaggagtat
cgttactggctgctcatctacgcccgattcctcgtcaacgaaggctccgagtttcgtcta
agagaactctgcaaggagctgctgggtcccgtccacaaatctgctgccacatcctgggag
cccacgactctgggtcttcgtaagcgggagctgctccgggaggttttacccgtcatcgga
gaaaacctgcgcttccagaggctgttcacggagtaccaggaccagctggagctgctgcgc
aacaaataa
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