Hippoglossus hippoglossus (Atlantic halibut): 117768476
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Entry
117768476 CDS
T07778
Symbol
gle1
Name
(RefSeq) nucleoporin GLE1
KO
K18723
nucleoporin GLE1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03013
Nucleocytoplasmic transport
hhip03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117768476 (gle1)
03015 mRNA surveillance pathway
117768476 (gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117768476 (gle1)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117768476 (gle1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
117768476
NCBI-ProteinID:
XP_034452738
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Position
9:complement(3318229..3324663)
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AA seq
709 aa
AA seq
DB search
MMPSESLRWKTLEALRNSPKGKISFDPRRWERSENILGGYKETISLSPQAGLVLDRLGSS
PLQTSSFLDSSSGHSSPGLSEQTPDSIVSRESIFEINAQALQVEREQTLSDEAKDEDPET
DDSEVSSPVPPPAISLLSPKAMEITSRIIKIEKEYREKAQVALRQRQEMQEKFVAELVSS
GSEQLKRFEEFMELKRRQEFQSIRDMMDRETKESIGRQEKLKEEQRHRMKILNLRLREAE
QQRVREAEMERQRQAEGRERLRNLNTIQEEILQLNQLLEPSSQSKNNLPPASLSSYSTRG
NQLCSQVSEVVRKTAEGAFPSVDDMTAAERALHEMRALIRLLQEEVAKVQEHKKGEEEAL
KKQAELQVQQEAQKKAAQLAKEKARRKGLQNSAEDTTLKWYKDLQDSAAQCAQSFEQLNS
PKDVQTKKLKLELQKSANIPISQIASNSGSQLREIFDKIDKLLSGRSVVSGGKSVSTSQH
PQGLDFVSYKLAEKFVKQGEEEVASHHEAAFPIAVVASGIWELHPRVGDLLLAHLHKKCP
YAVPHYPPMKDGTSVEEYQKILGYRVDDSGIEGQDSFLKRMSGMIRLYAAVIQLRWPYGS
KQGSAPHGLNHGWRWLAQMLNMEPLADITATLLFDFLEVCGHALMKQYQSQFWKLILLLK
EEYFPRIEAVTSSGQMGSVIRLKQFLETSLQRGEIKPPNGQLSSSFWRS
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgatgccttcggaaagtttacgctggaaaactctggaggctttgagaaactccccgaag
ggaaagatatcgttcgacccgcgccgctgggagcgaagcgagaatattctgggcggctat
aaagagaccatcagcttgtctccacaagccggcctcgtattggaccgtctgggctcctca
cccctgcagacgtcctccttcctggactccagctctggacactccagccccggcctgtct
gagcagaccccagactccattgtgtccagagaatcaatctttgaaatcaacgctcaggcg
ctgcaggtcgagcgtgagcagactctcagcgacgaggcgaaggatgaagatccagagaca
gacgacagtgaggtgtccagtcctgtgcctccaccggccatttccctgctgtcgcccaaa
gccatggagatcaccagccgcattatcaagattgagaaggaatatagagagaaggcccag
gtggcgctcagacagcgacaggagatgcaggagaagtttgtagcagagttggtgagttcg
gggtcggagcagctgaaacgcttcgaagagttcatggagctgaagcggaggcaggagttc
cagagcataagagacatgatggacagagaaaccaaagagagcatcgggcgacaagagaag
ctgaaggaagagcaaagacacagaatgaagatcctgaacctgcgactgagggaggcagaa
cagcagcgtgtgcgcgaggccgagatggagcggcagcggcaggcggagggcagggagagg
ttgagaaacctcaacaccatccaggaggagatcctgcagctgaaccagctgctggagccg
tcctcccagtctaaaaacaacctccctccggccagcctcagctcctacagcacccgcggg
aaccagctgtgctcgcaggtgtcggaggtcgtgagaaagacggcagagggggcgtttccc
agtgtggacgacatgactgcagctgaacgagccctccacgagatgcgggcgctgattcga
ctgctgcaggaggaggtggccaaggtacaggaacataaaaaaggggaggaggaagcgctc
aagaagcaggcggagctgcaggtgcagcaggaggcgcagaagaaggcggcgcagttggcc
aaagagaaggctcggaggaaagggctgcagaacagcgctgaagacactactttgaaatgg
tacaaggatcttcaggattcagctgctcagtgcgctcagtccttcgagcagctcaactcc
cctaaagacgtccagacaaagaagctgaagctggagctccagaaatccgccaacatcccc
atcagtcaaatcgccagcaactctggttcgcagctccgagaaatcttcgacaagatcgat
aagcttctgtcggggcggtcggtggtgtcgggggggaagtctgtctccacctcccagcat
ccacagggcctggactttgtcagctataaactggccgagaagtttgtgaaacaaggagag
gaggaggtggcgtctcaccacgaagcagccttccccatcgccgtggtggcctctggcatc
tgggagctgcacccgcgggtgggcgacctcctcctcgctcacctgcacaagaagtgtccg
tacgcagtcccacattaccctccaatgaaggacggtacatctgtggaggaatatcagaag
attctcggttaccgtgtggacgattccgggattgaaggtcaggacagtttcctgaagagg
atgtctgggatgatccgtctgtacgctgccgtgattcagctgcggtggccctacggctcc
aagcaggggtccgccccccacggtctgaaccacggctggcggtggttggctcagatgctc
aacatggagcctctggccgacatcacggcaacgctgctgtttgacttcctggaggtttgt
gggcatgctctaatgaagcaataccagagccagttctggaaactcatcctgctgctgaaa
gaggaatacttccccaggatcgaggcagtgaccagcagtgggcagatgggctcagtcatc
aggctcaaacagtttctggagacatcgctgcagagaggagagatcaaacctccgaacggt
caactgagctcctcgttctggaggtcgtga
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