Hippoglossus hippoglossus (Atlantic halibut): 117768529
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Entry
117768529 CDS
T07778
Symbol
smyd1b
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1b isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip00310
Lysine degradation
hhip01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117768529 (smyd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117768529 (smyd1b)
Enzymes [BR:
hhip01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
117768529 (smyd1b)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
117768529 (smyd1b)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117768529 (smyd1b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
Motif
Other DBs
NCBI-GeneID:
117768529
NCBI-ProteinID:
XP_034452872
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Position
9:8162461..8170264
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AA seq
489 aa
AA seq
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MENVAIFNSPGKGRGLKATKEFWAGDVIFSEPSLSAVVFDSLAERICHSCFRRQEKLQKC
GQCKFAHYCDRTCQRAGWAEHKQECGAIKSFHKAPNENIRLVARILWRMDKEGSIVSDMQ
LTTLDELEDHICDMQEEEMQEFKVDIHNFLDYWPRNSKQHTIDDISHIFGVINCNGFTVS
DQRGLQAVGVGLFPNLCLVNHNCWPNCTVILNHGNQSAVNTIFHSQRRIELRSLGKIAEG
EELMVSYVDYLNLSEERRRLLKTQYFFDCTCEHCKDHIKDDLKLGGREVDGVKPPEEQVK
EATDYCFSLLEKMDNARLNGDYHEVVKICRDCIEKTEPVLADTHIYLLRMWSTLSEVQAY
LQYFEEAADYTRKMVEGYMKIYNPNNAALGMAAMRAGVNHWQAGQIEVGHSMVCKAYAIL
MVTHGATHPITKDLEAMRMQTEMELRMFKQNEYVYHSMREAALKNKPMTMMNEPKSMEEG
IKNLFHRRK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgtggcaatattcaactcacctggaaaagggaggggtctgaaggcgaccaag
gagttttgggctggagatgtgattttttcagagcccagtctttcggccgttgtgttcgac
agtcttgccgagcgcatttgccacagctgtttccgcaggcaagagaagctgcagaaatgc
ggccagtgcaagtttgcacattattgtgaccgtacctgccagcgagccggctgggccgag
cacaagcaagagtgcggtgccatcaaatcctttcacaaagcaccaaatgagaacatccgt
ttggttgcccgcatcttgtggcgaatggacaaggaagggagcatcgtatctgacatgcag
ctgacgacactggacgagctggaggatcacatatgcgacatgcaagaggaggagatgcag
gagttcaaagtggacatccacaacttcctcgactactggccccggaacagcaaacagcac
acaatcgacgacatctcccatatctttggagtgatcaactgcaatggctttacagtcagt
gaccagaggggtcttcaggcagtgggagtcgggcttttcccaaatttgtgccttgtgaat
cacaactgctggcccaactgcactgtaatcctcaatcacggcaatcaatcggctgtgaat
actatctttcattctcaacggaggattgagctgcgttctttaggtaagatcgcagagggc
gaggagctgatggtctcatacgtggactacttgaatttgtcagaggagagacgaaggctg
ctgaaaacccaatatttctttgactgcacatgtgagcactgcaaggatcacatcaaggat
gatttgaagttggggggaagggaagtggacggagtcaagcctccagaggagcaggtgaaa
gaggcaacagactactgcttttcactgctggagaagatggacaatgctcgattaaacggt
gactaccacgaggtggttaaaatctgcagagattgcatcgagaaaacggaaccagttctg
gccgacactcacatctacttgttgaggatgtggagcacgctaagtgaggtgcaagcttac
ctgcagtactttgaggaagcagcagattacacccgtaaaatggtggaaggatacatgaag
atctacaacccaaacaatgctgctctcggtatggctgccatgagagccggagtgaaccac
tggcaggctggccagatagaggttggacatagtatggtctgtaaggcctatgccattctc
atggtcacccacggcgctacacatcccatcaccaaggatctggaggcgatgcgaatgcag
acagagatggagctgaggatgttcaagcagaacgaatatgtttaccacagtatgagagaa
gcagcactgaagaacaaaccaatgaccatgatgaatgaacccaagtctatggaggaggga
atcaagaatctcttccatcggaggaagtaa
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