KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117768547
Entry
117768547         CDS       T07778                                 
Symbol
atxn2
Name
(RefSeq) ataxin-2 isoform X1
  KO
K23625  ataxin 2/2L
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hhip03019]
    117768547 (atxn2)
Messenger RNA biogenesis [BR:hhip03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117768547 (atxn2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 117768547
NCBI-ProteinID: XP_034452903
LinkDB
Position
9:8349864..8369575
AA seq 1136 aa
MSMKAGGNRSKPGGGSAAGAPAPGAGGSGGGRQNLGRGRHSGKGPAAVIFNGVYANMRMV
HVLTSVVGTKCELKVKDGAVYEGVFKTYGPECDLVLDAAHSKSPEPSIGPRKEDIVESII
FKASDVVVVTFKDVDLSFAKKVSSDTDNFTDAAVSSRINGEHKEKDLEPWDGGETHNSDS
LESLDTDVSNGWDPNDMFKYNEEKYGVMSTYDSSLSTYTVPLERDNSEEFLKREARASQL
AEEIEASATYKARVALENDERSEEEKYTAVVRGEREPHTLSSRENKYIPPGQRNREAMSW
GPGRQNSPRLAQGSAGPSTPRPGPHDYSPNSGADQRVVNGGSSHWPSPCPSPSSRPPSRY
QSGPSSLPPRAATPTRPPSRPPSRPSRPPSHSSHPSYPSSSSSFSHHGPTSPASTLPKRM
SSEGPPRMSPKSQRTPRAHRVPPCRTTGIPPGVDLISHNAPGEVPVTTPSRSSSSGGTWS
SVVSGAHRPRSPRQNSMGGASPGSSSLPSPQTGTAPVETVVTPTSASSPTAACPAPNMVA
SPTGDAKECRVQETRQTSPTANKENIKPLESSPSIPRPVCKGPPSMAPDHRKQIDNLKKF
SVDFRLQSSSNPDPAFDQMMTKPPRDPADKPKDLPLDKTSTVAREGNEEGVVVIAAGTAA
GAPAPSSANTNTSKPGSPAALSPSPSAPDLKRAGLDVASQGVQTTATFSGAKHEEKEEKK
EAVQDQVRKSTLNPNANEFKPRFNQQPKPANTPTPPRPQGQPSPSIVVQQPPAVYSQTVC
FPQMYPLTPVSPGVQKSIIWKSPAMYQVQMPHMTVSQSKPYRPGKVPNMPQQRSDQHHPQ
GTPTMMHPVTAAGPPIVAQSPAYSAQYFTCSPQQFTSQPLVQQMTHYQSQAQHVFSPVMQ
GSARMMGPPTHGQPSLVSSSTTQYPEQTHTMYVSQGPMPQQYPHPSATLHAHPQHPQPSA
TPTGQGQQGGPQQHGGPPNHPSASPVQHPQHPQAAAAAAAAQALHMANQSPQQQMYSALA
PTPPSMTPGPNPQSPQASFPSAQQTVYIHPQQVQHGYNHNHMAHVQQAHMQSGLVQSHHQ
APNHPQMMLMATQGPPGGPQPQMPQNALNPIPVSSTTHFSYLAHPQVQPHHHQQQL
NT seq 3411 nt   +upstreamnt  +downstreamnt
atgtcaatgaaggccggtggaaatcgcagcaagcccggcggtggcagcgccgctggtgcc
cctgcccctggagccggaggaagcggcgggggacgacagaatctgggcaggggaagacac
agtggtaaaggtcctgcagcagtcattttcaatggtgtatatgcaaatatgaggatggtc
catgtcttgacttcagttgtggggaccaagtgtgagctaaaagtgaaagatggtgcagtc
tatgaaggagtctttaagacatatggtccagagtgtgacctggtgttggatgcagcccac
agtaagagccctgagccgagcataggccccaggaaagaggatattgtggagagcatcatt
ttcaaggcctcagatgtggtagtggtgaccttcaaagatgttgacctgagtttcgccaag
aaagtctcctctgatacagacaacttcacagatgcagcagtgagcagtaggatcaatggc
gagcacaaagagaaagatctagagccttgggatggtggagagacccacaactctgacagc
ctagagtctctggatacagatgtgtcaaatgggtgggaccccaatgacatgttcaagtac
aatgaggagaagtatggagtgatgtctacatatgacagcagcctctccacatatacggtc
cccctggagcgggacaactcggaggagttcctcaagagggaagcgcgtgcttcccagctg
gccgaggagattgaggccagtgccacatacaaggcccgcgtggccctggagaatgatgaa
cgctccgaggaggagaaatacactgcagtggttcgaggggagagggagcctcacacgctt
agcagcagggagaacaagtacattcctccaggtcagaggaacagggaagccatgtcttgg
ggaccaggacgtcagaattcacctcgtctggctcagggctcagccgggccctcgacccct
cgacccggacctcacgactacagtcccaactccggagccgaccagagggttgttaacgga
ggttcatcccattggccctcaccctgcccgtctccttcctcccgccccccctctcgttac
cagtctggcccctcctccctgcctcctcgggcggccacgcccaccaggccaccctccaga
cccccctctcgaccctccaggcctccctctcattcatcccacccctcctatccctcctcc
tcatcctccttttcccaccatgggcccacctcgccagcctccactctgcccaaacgcatg
tcttcagaaggtccacccaggatgtctcccaaatcccagcggacacctcgtgctcacaga
gtgccaccttgccggacaactggcatccctccgggagtggacttaatttcccacaatgcc
cccggagaggtcccggtgactaccccaagtaggagcagctcctctggagggacatggtct
tcagtagttagcggagctcaccgacctcgctcccctcgtcagaatagcatgggtggagcc
tcccctggctcctcttccctcccgtcacctcagacaggaacagctcctgtggaaactgtc
gtcacaccaacatcagcttcctctcctactgctgcttgtcctgctcccaacatggttgcc
tcaccaacaggagatgcaaaagagtgtcgtgttcaggagacgagacaaacatcccccacg
gcaaacaaggagaacatcaagcccttggagagctcgcctagtatccccagaccagtctgc
aaaggacccccttcaatggcaccagaccacagaaaacaaatagataatttaaagaaattt
agtgtagattttaggttgcagtctagttcaaacccagaccccgcctttgaccagatgatg
accaagccacccagagatccagcagacaagcctaaagaccttcccctggacaaaacctcc
accgtggcgcgggagggcaatgaagagggtgttgtagtgattgctgctggaactgctgcg
ggtgcccctgctccttcctctgccaacacaaacaccagtaagcctggcagccctgctgct
ctgtccccatctccctcagccccagatctaaagagggcagggctggacgtggcctcgcag
ggagttcagacgacggccacattcagtggagccaagcatgaagagaaggaggagaaaaag
gaggctgttcaagatcaagtgagaaaatcaaccctgaacccaaacgccaacgagttcaaa
cccaggttcaatcaacagcccaaaccagccaacaccccgacaccccctcgtcctcagggc
cagcccagcccctccattgtcgtccagcagcccccggctgtctacagccagacagtctgc
ttcccccaaatgtatccgctcacacccgtcagcccgggagtgcagaaaagcataatatgg
aagtctccagctatgtaccaggtgcagatgcctcatatgaccgtcagccagtctaaaccc
tacagaccaggtaaagtacccaacatgccccagcagaggtcagaccagcaccacccgcag
ggcacgcccaccatgatgcacccagtgacggcagcaggaccgcctattgtagcacagagc
cccgcctattctgcccagtacttcacctgcagcccgcagcagttcaccagtcagccactg
gtccagcagatgactcactaccaatcgcaggcgcagcatgtgtttagtccagtaatgcag
gggagtgccaggatgatggggccacccacacacggccaacccagcctcgtctcctcttca
actacacagtacccagagcagacacacaccatgtatgtgtctcaagggccgatgcctcag
cagtacccccaccccagtgccactttgcacgctcacccacagcacccgcagccctctgcc
acgcctacaggccaaggccagcagggtggtccccaacagcatgggggtcctcccaaccat
ccatcagccagcccagtccagcacccacaacacccgcaggctgctgcagctgcagcagca
gcccaggccctccacatggccaaccagtctccacagcagcagatgtactcagccttggcc
cccacgcccccctccatgaccccagggcccaaccctcagtctccccaggcatcgttcccc
tctgcccagcagacggtctatatccacccgcagcaggtgcagcacggctacaaccacaac
cacatggcgcacgtgcagcaggcccatatgcagtctggtttagttcagtctcaccaccag
gcgcctaaccaccctcaaatgatgctgatggccacccaggggcctccaggggggccgcag
ccccaaatgcctcagaacgccctcaaccccatcccggtttcatccaccacacatttctcc
tacctggcacatccacaagtgcagcctcatcatcatcagcagcagctgtag

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