Hippoglossus hippoglossus (Atlantic halibut): 117768860
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Entry
117768860 CDS
T07778
Symbol
slit3
Name
(RefSeq) slit homolog 3 protein isoform X1
KO
K06850
slit 3
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hhip00536
]
117768860 (slit3)
Glycosaminoglycan binding proteins [BR:
hhip00536
]
Heparan sulfate / Heparin
Axon guidance molecules
117768860 (slit3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
LRRNT
LRR_9
Laminin_G_1
hEGF
LRRCT
EGF_TEN
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
LRR_NXF1-5
LRRCT_2
LRR_6
Motif
Other DBs
NCBI-GeneID:
117768860
NCBI-ProteinID:
XP_034453161
LinkDB
All DBs
Position
10:complement(21026196..21259069)
Genome browser
AA seq
1538 aa
AA seq
DB search
MPRTGAVRRAALCRLWALVVALLVSVGSVSGCPHKCSCSGSHVDCQGLGLKTVPKGIPRN
AERLDLNRNNITRITKVDFSGLKNLRILHLEDNQITVVERGAFQDLRLLERLRVNRNKLQ
VLPELLFQSNPKLGRLDLSENQVQAVPRKAFRGITNVKNLQLDSNHISCIEDGAFRALRD
LEILTLNNNNITLIPLSSFNHMPKLRTLRLHSNNLHCDCHLSWLSDWLRARRGLAPFTQC
MAPAHMRGLNVPDVQKKDFACNGPAQTELRTCVPQLAVCPQSCSCNNNIVDCRRKGLTEI
PANLPEGIVEIRLEQNLIKSVPAGAFTAYKKLKRIDLSKNQISDVAADAFSGLRSLTSLV
LYGNKITELPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKMQTISKG
LFAPLRSIKTLHLAQNPFMCDCHLKWLADYLFDNPIETSGARCSHPRRLANKRLSQVKGK
KFRCTGQEDYRSRLSGECFQDLVCPEKCRCEGTVVDCSNLKLTRLPPHIPDHTTDLRLND
NEIAVLETAGTFKKLPNLKKINLSNNKLRDIREGAFDGAVGVLELLLTGNKLTGLQGRMF
RGLTGLKTLMLRSNQISCIDNSTFTGLSSVRLLSLYDNRITSIAPGAFSTLHSLSTINLL
SNPYVCDCHLSWLGQWLKKTRVVSGNPRCQKPAFLKEIPIQDVANPDFTCDGVEDNGCLP
TSGCPDACTCSDSVVRCSNRGLHSLPKGIPKDATELYLEGNMLTSVPKELASLKQLSLVD
LSNNSISTLAQFTFNNMTQLATLILSYNQIRCIPVHAFDGLKSLRLLTLHGNDLSTIPEG
AFNHLTALSHLALGANPLYCNCDLRWLSQWVKAGFKEPGIARCTGPPDMADRLLLTTPLN
RFQCKGPVDISLMSKCAPCLGAPCQNNGTCVSESTGTYHCTCPYGFKGQNCEIPINACIS
FPCSNGGTCHIQPGQEDFFSCVCPAGFEGHRCEMNPDDCEDNDCENNSTCIDGVNNYTCI
CPPNYTGDLCEEVVDPCLHGFDPCQHDSKCVHVGRSYRCDCLPGYVGQHCEQDYNDCLEN
KCQHGAECVDAVNGYTCVCKEGFSGLFCENPPPMILLQTSPCDHSDCQNSAQCLLVAGEP
VCRCMPGFYGNKCDKLATAHFLGRDGYVELPGVKLRPNAHISLQVSTDKDNGILLYKEDH
DPLALELYQGHIRLIYDIANYPPTTVYSVESVNDGLFHMVELLIQNRSLSLVVDNGAPKS
LGKLARQPSVDHNTQLYIGGVPSQVVALGLRPGPDRSPQAFYGCIHNVRINGEPQDLNHR
AMGGGRSQGVESKGDGILAGCHTCSVCAQGVCREGGEMGVTCECPPGRSGALCEQTTTPT
PCQSSRCVQGACVPKGQSYSCQCREGYQGQYCDRRQEPPACRGQRCGHGECRVSEVGEPI
CHCQPGFTGTTCDTELTCQGEMLREQLKRHHPMRTCTSTSKIPRMDCPRSCQAAAPPGVC
CGVTKTRRRKAVFRCSDGTSYSEEMESALECGCSKCPL
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggaccggagcggtgcggcgggctgcgctctgccggctttgggctctggttgtc
gcgctgctggtgagcgttggctcggtgagtggatgccctcacaagtgcagctgctccggg
tcgcatgtggactgccagggtctgggtttgaagactgtgcccaaaggaataccgaggaat
gccgagcgcctggatctgaacagaaacaacatcaccagaatcaccaaagtggacttctct
ggcctcaagaaccttaggattcttcatctggaggacaaccaaatcaccgtcgtcgagaga
ggagcctttcaagacctcaggctgctggagaggcttcgtgtgaacagaaataaactccag
gttctcccagagcttctcttccagtccaaccccaaactaggacgactagacctcagcgag
aaccaggttcaggcagttcccaggaaagctttcagaggaatcaccaatgtcaagaacctg
caactggacagcaaccacatcagctgcatcgaagatggagctttccgggcgctgcgcgat
ctggagatactcaccctcaacaacaacaacatcaccctcatccccctgtccagcttcaac
cacatgcccaagctgcggacacttcgtctgcactccaacaacctccactgtgactgtcac
ctgtcctggctctctgattggctccgagccagacggggcctggctcccttcactcagtgc
atggcccccgcccacatgaggggcctcaacgtcccggatgtgcagaagaaggattttgct
tgcaatggtccggcccagaccgagttgaggacttgtgtcccccagttggccgtgtgtcca
cagagctgcagctgcaacaacaacatcgtggactgtcgtcgcaaaggcctcactgaaata
ccagccaacctcccggagggcatcgtggagattcgtttggagcagaacttgattaaaagt
gtcccagcaggagccttcactgcctacaagaagctcaagaggattgacttaagtaagaac
cagatttctgacgttgctgctgatgctttcagtggccttcgctcactcacctcattggtg
ctgtatggcaacaagatcaccgagttgcccaagggattgtttgatggactggtttccttg
cagctgctgcttctgaatgcaaacaaaattaactgtttgagagtcaacaccttccaagac
ctgcagaacctcaacctgctttcactgtacgacaacaagatgcaaaccatcagcaaagga
ctgttcgcccctctgcgctccatcaagactcttcatctggctcagaatccctttatgtgt
gactgccacctgaagtggctggccgactacctgtttgacaatcccatcgagaccagcgga
gctcgctgcagccaccccaggaggctggcaaacaaacggctcagccaggttaagggcaag
aagttcaggtgcacaggtcaggaggactaccgcagccgtctgagcggcgagtgtttccag
gacctggtgtgtccggagaaatgtcgatgtgaaggcaccgtcgtcgactgctccaatctc
aaactgacccgtttacctccgcacatccccgatcacaccacagacctgcggttaaacgac
aatgagattgccgtcctggagactgcggggacatttaagaagctgcctaacttgaagaag
atcaacctgagcaacaacaagttgagggacattcgtgagggtgcgttcgatggggcggtt
ggcgttctggagctgctcctgacaggaaacaagctaactggactgcagggacgcatgttc
aggggcctcactggcctgaaaactctaatgttgaggagcaaccagatcagctgcatcgac
aacagcacgtttacaggtctgagctcagtgcgtctcctgtcgctgtacgacaacaggatc
accagcatcgccccgggagccttctccaccctccactccctgtccacgatcaacctcctg
tccaacccgtacgtgtgtgactgtcacctgtcctggctcggtcagtggctgaagaagacc
cgggtggtcagtggaaaccctcgctgtcagaaaccagccttcctgaaggagatccccatc
caggacgtggcaaaccctgacttcacatgtgacggtgttgaggataatggttgtcttcct
acgtctggctgtcctgacgcctgcacgtgctcagacagcgtggtgcgctgcagcaacaga
gggctgcactctctgcccaagggcattcccaaggacgccaccgagctttacctggagggt
aatatgctgacatctgtgcccaaggagctggcatccctgaagcagctgtcactggtggac
ctgagcaacaacagcatcagcaccctggcccagtttaccttcaacaatatgacgcagcta
gcaacactcatcctgagctataaccagattcgctgcatcccggtccatgccttcgacggc
ctcaagtcacttcgcctgctgactctccatggcaacgacctctcaactatcccagaagga
gctttcaaccacctcaccgctctgtcccacctggctctcggtgccaatcccttgtactgt
aactgtgacctgcgctggctctcccagtgggtcaaggctggttttaaagagcctggaatt
gctcgttgtaccggacctcctgacatggctgacaggctcctgctcaccacaccactcaac
agatttcagtgtaaaggtccagtagacatcagcctgatgtcgaaatgcgccccctgcctg
ggggcgccgtgccaaaacaacggtacctgtgtctctgagtcgactggaacctaccactgc
acctgtccatatggattcaagggtcaaaactgtgaaatacccatcaacgcctgcattagt
ttcccctgctcgaacggaggaacctgccacattcagcctggccaggaagacttcttcagc
tgtgtgtgtccagccggttttgaaggccatcgttgtgagatgaacccagacgactgtgaa
gacaacgactgtgagaacaactccacctgcatcgatggggtcaacaactacacctgcatc
tgtccacccaactacacaggtgacctctgcgaggaggtggttgacccctgtctccatggt
ttcgacccctgtcagcatgactcaaagtgcgtccatgtcggccgcagttacaggtgcgac
tgtttgccgggatacgtgggccaacactgcgagcaggactataatgattgtctggagaat
aagtgtcaacacggagcggagtgcgtcgacgctgtcaacggctacacctgcgtctgtaaa
gagggtttcagcgggctgttctgtgagaaccctccaccaatgatcttgctgcagaccagc
ccctgcgaccactcagactgccagaacagcgcccagtgcctgctggttgccggggagccc
gtttgccgctgcatgcccggtttctatggcaacaaatgtgacaagttggccaccgctcac
ttcctgggtcgcgatgggtacgtggagctgcccggtgtgaagcttcgccccaacgctcat
atttcattacaggtgtccacggataaagacaacggtattttgttgtataaggaggaccac
gaccctctggcactggagctttaccagggacacatccgactcatctacgacatcgccaac
tacccaccaaccacagtgtacagcgtggagtcggtgaacgatggacttttccacatggtt
gagctgctgattcagaaccggtcgctgagcctggtggtggataacggagcccccaagagc
ctgggcaagctggctcgccagccgtctgtcgaccacaacactcagctttacataggaggc
gttccttctcaagtggtggccttgggtctacgtccaggccccgaccgttctcctcaggcc
ttttacggctgcatccacaatgtccgaatcaatggggagcctcaagatctgaatcacaga
gccatgggaggagggcgatcccagggagtcgagagcaagggcgatggtatcctcgcaggg
tgtcatacctgcagtgtgtgtgcacagggtgtgtgcagggagggcggagagatgggggta
acatgtgagtgtcctccaggacgcagcggggccctgtgcgagcagacgacaacaccaacc
ccctgtcagagcagcagatgtgttcaaggtgcgtgtgtgccaaagggtcagtcctacagt
tgtcagtgtcgtgaaggctaccagggtcagtattgcgatcgacgacaggagcctccggcc
tgcagggggcagcgctgcggacacggggagtgtcgcgtgtcagaggttggagagccgatc
tgccactgtcagcccgggttcaccggaaccacctgtgacacagagctgacgtgtcaagga
gagatgttgagggagcagctgaagcgtcaccaccccatgagaacgtgcacgtccaccagc
aagataccgcgcatggactgtccccgatcctgccaggctgcagcgccccctggtgtttgc
tgtggcgtcaccaagaccagaaggaggaaggcggttttccgctgctctgacggcacctcg
tactcagaggaaatggagagcgctctggaatgtggctgctccaagtgcccgttgtaa
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integrated database retrieval system
