Hippoglossus hippoglossus (Atlantic halibut): 117769040
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Entry
117769040 CDS
T07778
Name
(RefSeq) protocadherin alpha-3-like
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
TMEM154
Motif
Other DBs
NCBI-GeneID:
117769040
NCBI-ProteinID:
XP_034453512
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Position
10:complement(15849236..15854861)
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AA seq
791 aa
AA seq
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MATSDSKGQRLDVWIFFCLALLVVIQLDGISAQIRYSIQEEVKLGTPVGNVAKDLGLDLG
RLVERNLRVVSGTKQDLFKVNARDGVLLVNQRVDREELCAKTSPCVANLKAVVENPLEMH
QVIVEIIDVNDNSPKFPEENYTLEVLESAVVGSRFQMEGAHDLDVGLNSLQSYKLSNNQY
FRLETEESGEDGKVPFLILQRPLDREHTTQHWLQLTASDGGKPSKSGAINITVIVSDIND
NSPVCHKQKYTVTIKENAPAGTFLLTVNATDSDEGINGEIEYSLRGKLRGLSSEPFDLDR
RTGRLTVKGGLDYEEKQVYEIKVLAADKGAVSLSTHCNVVVRVEDVNDNHPEIEITSLSS
RIPEDAPLGTVVALMGVTDLDSGVNGQVVCSVPGHLPFDLKPSPDGQSYSLITRDYLDKE
TMHMYEIKITAKDLGSPALSSTKVIQVEVLDVNDNRPLFTETPYTFYVPENNKAGMSIFS
VRATDADGGENAAVTYSLDRKSPGPTVTSFLNINEANGTILALKSFDFETVKTFKFHVVA
SDSGTPSLSSNVTVNVFILDQNDNAPVILYPVSSNGSAEGVEEIPRNVNAGHLVTKVRAY
DADIGYNGWLLFSLQQVTDHSLFGLDRYTGQIRTLRSFTETDEAEHKLLILVKDNGNVSL
SATATVIVKVVEPKEAFAASDVKSSTKADEDTNVTFYLMITVGSVSALFLVSIIVLISMQ
CSKSTDFTSKYLPEPNYDGTLCHSIQYRSGDKRYMLVGPRMSIGSTIVPGSHANTLMLPD
RRGTSGELDPG
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatcggacagcaaaggacagcgactggatgtgtggattttcttttgtctggcg
ctgctggttgtgattcaactggatggaatctctgctcaaatccggtattccatccaggaa
gaagtgaaattagggacgccagtgggaaacgtggccaaagaccttggattagatcttggg
cgactggtggaaaggaacctccgtgtcgtgtcaggaacaaagcaggatctgtttaaggta
aatgcgagagatggggttttgttggtaaaccagcgagtggacagagaggagctgtgcgca
aaaacctctccgtgcgtcgcaaatctgaaagcggtggtcgaaaatcccctcgagatgcat
caagttatagttgaaataatcgatgtaaacgacaactcgccgaaattccccgaagaaaac
tacacattggaggtactggagtccgccgtcgtgggatctcgatttcaaatggaaggagcc
cacgacttggatgttggtttgaattccttacagtcatataagctgagcaacaaccagtat
tttcgactggaaacagaggaatctggggaggatggaaaagtgccattcctgattttacaa
cgacctctggatagagaacacacaactcaacactggttacaattaacagcgtcagatgga
gggaaaccatcgaaatctggcgcaattaatatcaccgttattgtgtcagacattaatgat
aactcacccgtgtgtcataaacagaaatacaccgtgacaataaaggaaaacgcacctgca
gggacattccttctgacagtgaatgcaacagactcggatgagggtataaacggtgagata
gagtattctctgaggggtaaactcagaggcctgtcttctgagccgtttgatttggatcgt
agaactggcagactaacagtgaaaggaggcctcgattacgaagagaagcaggtctacgag
attaaggtgctggctgcggacaaaggggccgtgtctctgtccacacactgcaacgtggtg
gttagagtggaagacgtgaatgataaccatcccgagatagagatcacgtccctctccagt
cgcattccagaggacgcacctcttggcacggtggtggcgttgatgggtgtgacggacttg
gactcgggtgtgaatggacaggtcgtgtgcagtgtgcctggacatttgccttttgactta
aagccatcccccgacggacagtcatactctttgatcaccagggactacctggataaggaa
acaatgcacatgtatgagatcaagataacagctaaagatttagggagccccgcactgtca
tctaccaaggtgatacaggtggaggtgctagacgtcaatgataacagacctttgttcact
gagactccatacactttttatgtgcctgaaaataacaaggctggaatgtcaattttttca
gtgcgtgccactgatgccgatggaggtgaaaatgcagcagtcacatattcactcgaccgg
aagagtccaggtcccactgtaacctcctttttaaatataaacgaagccaatggcacgatt
ttagcgctgaaaagtttcgactttgaaactgtgaaaacgttcaagttccacgttgttgcg
tcagattctggaactccgtcactgagcagcaacgtcacagtgaacgtgttcattctggat
cagaacgacaacgctccagtcatcctgtatccagtcagctcgaacggttctgctgaaggt
gtggaggagattccccgcaatgtgaacgctggacacttggtgactaaagtcagagcctat
gacgctgatataggatataacggctggttactgttttcactgcagcaagttactgaccac
agtctctttggtttggaccgctatacaggacagatcagaacacttcgctcattcacagag
acagacgaggctgagcacaaactgctcatactggtcaaagacaatgggaacgtgtcactc
tcagcaacagctactgtcatcgtcaaagttgtggagcccaaagaagcttttgcagcttct
gatgtgaaaagttcaacaaaagcagatgaggacactaatgtgactttttacctgatgata
actgtgggctcagtttcagctctttttctcgtcagtatcatcgtgctgatttcaatgcag
tgctcaaagtccacagacttcacttcaaaatatctaccagagcctaattatgatgggaca
ctgtgtcacagcatccagtacagatctggagacaaacgctacatgttagttggacccagg
atgagtatcggatctactatagtcccaggaagccatgccaatacactaatgctgcctgac
aggagagggacatctggagagttggacccaggatga
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