Hippoglossus hippoglossus (Atlantic halibut): 117769041
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Entry
117769041 CDS
T07778
Symbol
elp1
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhip03016
]
117769041 (elp1)
Transfer RNA biogenesis [BR:
hhip03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
117769041 (elp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_EML_2
TPR_GEMI5
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
117769041
NCBI-ProteinID:
XP_034453513
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All DBs
Position
10:complement(25167578..25177369)
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AA seq
1317 aa
AA seq
DB search
MRNLKLLKSLCSSELNGPGSPQFLCVRADTGSLLVASQYSVTEYDPRGEQVVNEASLTAN
GFLPEDGSGVVVGLQDLAELESACVATTGGDVVLFNLNTCQLECVGSVDSGLTSMSWSPD
EELVILTTGQETIIMMTKEFEPITEVGIHQDDFGEGKFITVGWGKKETQFHGSEGKQAAQ
RKTQEVQPAAGWDDRRPRVTWRGDGQLFAVSAVCPQTGARKVRVWNREGVLQSTSEPING
LEQALCWKPSGSLIASTQRHPNKHSVVFMEKNGLLHGDFTLPLSKDQAKVKDLLWNTDST
VLLVWLEDMTPGEDGQVNTYIQLWTVGNYHWYLKQSLSFGRDPQKAPVSVCWDPERPLKL
HLVRRDWSTTTYDWGWTTERSPGLDATDNANVAVIDGDKILMTTFRQGIVPPPMCSLELQ
LKSPANQVTFLCRPQRTNQLAVFTANGEISVYSQDSGEHVDKTADGFRIVTRPLLLQKTF
SGPLLRDDPLALRQLLWLEDELFVCVSSGLLPTTSTLQMLRPAQDDRDTLAVRCEIEVDG
VVVSMVHCSQTGTLALQLEDGQIRKVLWDCAEPLVDVWRDSSGCTTNFPVPCVQTALCSI
SGEEYLLGLTDRSHMYAGDTELASNVSSFAVCNNFLLITTHSHTCRCLHLSALTVKGLQA
ALSSDGGQNDETLRRVERGSRIVTVVPQDTKVILQMPRGNLETVHHRALVLAQLRKWLDG
LRFREAFECMKKLRINLNLIYDHNPKVFLENMDTFITQLNSINLINLFLTELKDEDTTST
MYPRPESSPVQSQRASGQKKVDVVCDALRNAMESMDPNKFCLSILTAHVKKTVPELEIAL
QKVHELRENPSAAPGAVSAEEALKYLLFLVNVNDLYEHSLGTYDFDLVLMVAEKSQKDPK
EYLPFLNMLKRLEPNYQRYTIDKHLKRYSKALLHLSKCGQEHFLEALQLVKEQKLYSEAL
RLFPANSVQYKALSCSYAEHLVEQQQAEQAGLLLWRCGESVSALQAFASSSSWRNAICVA
QQIPLPPDQLALLARDLAEKLTEQRRFSEAALLLDQYAKDCEEAILALITGAVWEEALRL
IYMHNRQDITETNLKPALLEAVGTQTVFLEAQIATFTRHRTRLAVVREQKEKARLDMLDE
EGPDCPDAELYSEASTVMTGSKYSQSNSRISSRSSKNRRKAERKKLSLKEGSPLEDRALM
YALGEIFTTVDKMREEVHNLLKGLVLFQYDKQAEKLQLGYDEALHTMEAALPEVWPEGLQ
NNQAPLTGPNSTANSIMASFQQQQQQQQRPAAPQQDAEAMPPPRMRNGIKWKLTILN
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacctgaagctgctgaagagcctgtgcagctcggagctgaacggtcccggctca
ccgcagttcctgtgcgtgcgggccgacaccggctcgctgctggtcgcctctcagtactca
gtcacagagtacgacccccgaggtgaacaggttgtcaatgaagcctcattaacggcgaat
ggtttcctcccggaggacggcagtggggtggtggtcggactgcaggacctggcagaactg
gagtcggcgtgcgtggccacaactggcggcgatgtcgtcctcttcaacctcaacacgtgc
cagttggagtgtgttggcagcgtggacagcggtctgacctccatgagttggagtcccgat
gaagagctcgtcattctcacaaccggccaggaaacaatcatcatgatgaccaaagagttt
gagccgatcactgaggttggaatccaccaggacgactttggtgaaggaaagttcatcaca
gtgggttgggggaagaaggagacgcagttccacggctcagaggggaaacaggcagcacag
aggaagacccaggaggtgcagccagcggctgggtgggacgaccgcaggccgcgggtgacg
tggcgaggtgacggtcaactgttcgccgtcagtgccgtctgtcctcagaccggagccagg
aaggtgcgggtgtggaacagagagggtgtcctgcaatccaccagtgagcccatcaacggc
ctggagcaggcgctctgctggaaaccctccggcagcctgatagcgagcactcaacgtcat
cccaacaaacacagcgtggtgttcatggagaagaacggactcctgcacggagacttcacg
ctgccgctcagcaaggaccaggccaaggtgaaggatctgctgtggaacactgactccaca
gtcttacttgtctggttggaggacatgacgcctggagaggacggacaggtcaacacttac
atccagctgtggacggtaggaaactaccactggtacctgaaacagagtttgagcttcggc
cgagaccctcagaaggcgccggtctcggtctgttgggaccctgaacgccccctgaagctc
catctggtgagacgcgactggtccaccaccacttacgattggggctggacaacggagcgg
agtcccgggctggacgccactgacaacgccaacgtggctgtgatcgatggagataaaatc
ctgatgacaaccttcaggcagggtatcgtccctccgcccatgtgctcattggagctgcag
ctgaaatcaccagccaaccaggtgacgttcctctgccgacctcagaggaccaatcagctg
gcagtgttcaccgctaatggagaaatctcggtctacagccaagattcaggagaacatgtc
gacaaaacagctgatggcttcaggattgtgactcgtcccctgctcctccagaaaaccttc
agtggaccacttctacgggatgacccgctcgccctgcggcagctgctgtggctggaggac
gagctgtttgtgtgtgtcagctccggtctgctgccgacgacctccacgctgcagatgctc
cgacctgctcaggatgatcgtgacacgctcgctgtcaggtgtgagatagaggtggacggt
gtggtggtcagtatggttcactgctctcagaccggcactctggccttacagctggaggac
ggacagatcaggaaagttctctgggattgtgctgagcctttggtggacgtttggcgtgac
tccagtggatgtaccactaacttccctgttccctgcgttcagacggcgctctgcagcatc
agtggagaggaatatctgcttggcctgaccgacagatcccacatgtacgctggagacaca
gagctggcctccaacgtttcctccttcgccgtctgcaacaacttcctcctcatcaccaca
cactcccacacctgccgctgcctccacctgagcgctctcacggtcaaagggctgcaggcg
gctttgtcctcggacggaggtcagaatgacgagacgctgcgtcgggtggagagaggatcc
aggatcgtcactgtggtgcctcaagacaccaaagtgattctacagatgcctcgtgggaac
ctggagactgtgcatcatagagcgctggtgttggctcagctcaggaagtggttggacggt
ttgaggttcagagaagcttttgagtgtatgaagaagctgaggatcaacctgaacctcatt
tatgaccacaacccaaaggttttcctggagaacatggacaccttcatcacacaactgaac
tccatcaacctcatcaacctcttcctcactgagctcaaagatgaggacacaaccagcacc
atgtaccctcgtcctgagagcagcccagttcagtcccagcgagcctctgggcagaagaag
gtggatgtggtttgtgatgctttacggaacgccatggaatcaatggatccaaacaagttc
tgtctgtcaatactgacggctcatgtgaagaagacggttccagagctggaaatcgctctg
cagaaagtccacgagcttcgagaaaatccttctgcagctccgggcgccgttagtgctgaa
gaagcgttgaagtacctcctcttcctcgtcaatgtcaacgacctttacgaacactctctg
ggaacgtatgacttcgaccttgtgctcatggtggcggagaaatcccagaaggaccccaaa
gagtacctccccttcttaaacatgctgaagcgcctggagccgaactaccagcgctacacc
atcgacaagcacctgaagcgctacagcaaggctctgcttcacctcagcaagtgtgggcag
gaacatttccttgaagctctgcagctggttaaggagcagaaactctacagtgaagctctg
agactgttcccagcaaacagcgttcagtacaaggctctgagctgctcctatgccgagcac
cttgtggagcagcagcaggcggagcaggccggcctgttgctatggcgatgtggagagtcc
gtcagcgccctgcaggcgttcgccagcagctccagttggagaaatgcgatctgtgtggcg
cagcagatcccgctaccgcccgaccagctcgctctgctggccagggacctggcagagaag
ctgactgaacagcggcggttctcagaagctgctctgctgttggaccagtacgccaaagac
tgtgaggaagccatcttggctctgatcacaggtgcagtctgggaagaggcgcttcgattg
atttacatgcacaaccggcaggacatcacagaaactaacctgaaacctgctctgctagag
gctgtcggcactcagaccgtcttcctggaggctcagatagcgacgttcacgcgacacagg
acccgactggctgtggttcgagagcagaaggaaaaggccagactggacatgctggatgag
gaaggtccagactgtcctgatgctgagctttactctgaagccagcactgtgatgaccggc
tccaaatactcccagagcaactcccgcatttcctcgagatcgtcaaagaaccgacggaaa
gccgagcggaagaaactcagtctcaaggaaggaagccccctggaggacagagcgctgatg
tacgccctgggtgagatcttcaccaccgtggacaagatgagagaggaggtgcacaacctg
ctgaagggcctggtgctgttccagtatgacaagcaggcagagaagctgcagctgggctac
gacgaggctctgcacacgatggaggccgcgctgccggaggtgtggcccgaaggcctccag
aacaaccaggctccgctcactggaccaaactcgactgcaaacagcatcatggcctcgttc
cagcagcagcagcagcagcagcagcgacctgcagctccacaacaagatgctgaggcgatg
cctccaccgaggatgagaaacgggatcaagtggaagctcacgattctcaattag
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integrated database retrieval system
