KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117769044
Entry
117769044         CDS       T07778                                 
Symbol
smu1a
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hhip03041]
    117769044 (smu1a)
Spliceosome [BR:hhip03041]
 Complex B
  Other components
   Complex B specific factors
    117769044 (smu1a)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_CAF1B_HIR1 WD40_Gbeta ANAPC4_WD40 Beta-prop_EML LisH_TPL Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_ACSF4 Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_VPS8 WDR90_beta-prop_4th Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_NWD2_C Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_BBS7 Beta-prop_DCAF12 Beta-prop_WDR75_2nd Beta-prop_IP5PC_F WD_LRWD1 PROPPIN VPS8_N LisH DUF7165 zf_topless LisH_PAC1 Beta-prop_IFT122_2nd PA14
Other DBs
NCBI-GeneID: 117769044
NCBI-ProteinID: XP_034453519
LinkDB
Position
10:25150286..25156768
AA seq 513 aa
MSLEVESADVIRLIMQYLKENNLHRTLVTLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYINLENL
LARSYFDPREAYPDGSSKEKRRAAIAHALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEERFPTQLCRHVKFGQKSHVECSRFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMGFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCVSFCKDSSQLLSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTPD
GHHVLSASSDGTVKVWNMKTSECSNTYKPLGTSAGTDITVNNVIILPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TIHEKDVIGIAHHPHQNLIGTYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctctggaggtggaatctgcagacgtgatccgtctgatcatgcagtatctgaaagaa
aacaatctgcaccggaccctggtcaccctgcaggaggagaccacagtgtccctgaacacc
gtggacagcattgagagttttgtagcagacatcaacagtggccactgggacactgttctt
caagccatccagtccctgaagctcccagacaagactctgatagacctttatgaacaggtt
gtgctggagctgattgagctgagagagctgggagcggctcgttcccttctcaggcagacg
gaccccatgatcatgctcaaacaaacccaaccagagagatacatcaacctggagaacctg
ctggctcgctcctacttcgaccccagagaggcgtacccagacggcagcagtaaggagaag
cgccgagctgccatcgcccatgccctggccggggaggtcagtgtggtgcccccctctcgt
ctcatggctctgctgggacagtcactgaagtggcagcagcaccagggtctcctgcctcct
ggtatgaccattgatctgttcaggggtaaagctgctgtgaaagatgtggaggaggagcgt
ttccccactcagctctgcagacacgtcaagtttggacagaaatctcacgtggaatgttcc
cggttctcccccgacggtcagtacctggtcacaggctccgtggacggcttcatcgaggtc
tggaacttcaccaccggcaaaatcagaaaggatctgaagtaccaggctcaggacaacttc
atgatgatggatgatgccgtgttgtgtatgggcttcagccgggacacagagatgttggcc
accggagcgcaggatggaaagatcaaggtttggaagatccagagcggtcagtgtctgagg
agattcgaacgtgcccacagcaaaggagtaacgtgcgtgagcttctgtaaagacagcagc
cagctcctcagcgcctcctttgaccagaccatcagaatccatggactgaagtccggtaaa
actctgaaggagttccgtggtcactcctcatttgtcaacgaggccacgtttacaccggat
ggtcaccacgtcctcagcgcttcctccgacgggacagtgaaggtttggaacatgaagacc
agcgagtgctcaaacacctacaaacctctgggcacgtcggccggcaccgacatcaccgtc
aacaacgtcatcattctgcccaagaacccggagcacttcgtcgtgtgtaaccgctccaac
acggtggtcatcatgaacatgcagggacagatcgtgaggagcttcagctccggtaagagg
gaaggcggtgactttgtgtgctgcacgctgtcgccccgcggcgagtggatctactgcgtg
ggagaggactttgtgctctactgcttcagcacagtgacgggcaaactggagagaacactg
acgatccacgagaaggatgtgatcggcatcgcccaccacccgcaccagaacctcatcggc
acctacagtgaggacggccttctgaagctctggaagccttga

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