Hippoglossus hippoglossus (Atlantic halibut): 117769095
Help
Entry
117769095 CDS
T07778
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04120
Ubiquitin mediated proteolysis
hhip04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117769095 (syvn1)
04120 Ubiquitin mediated proteolysis
117769095 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117769095 (syvn1)
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117769095 (syvn1)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117769095 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
117769095
NCBI-ProteinID:
XP_034453605
LinkDB
All DBs
Position
10:complement(6984919..6994079)
Genome browser
AA seq
637 aa
AA seq
DB search
MVRATLVTATSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISCVFHLRVLSLIGLLGVLDFLFVHHACQSIITRGASVQLVFGFEYAI
LLTMVLTTFIKYVLHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQTPAPAQAPPPAPAAPANAP
AAPPANVAPGMLPGFPPGIFPFWGPFPAVPPPPAAAAAADGPGATDAAQSSTEASGTSQP
SSSTGDTSTAAAAPGSAIPGFPFSFPPPPFPSAPWLPMPPPPPFVSSMPPPPPSLSRMSE
EELRELEAEGRQGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLTPPRAEGSTGEASGT
NHSASSAAAGSSTESQSQETDSGPSLDQVNGATVSSQAADSTSAASETESKENIDDEELL
EDAVEVEGGEPNAAELRRRRLRKLESASSSSSPPPDN
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggtacgagcaaccttggtgacggccaccagtctggctctgactggggctgtggtggca
cacgcttacctcctcaagcaccagttctacccgactgtggtctacctcaccaaaagcagc
cccagcatggcggtgttgtacatccaggcctttgtgctggtgtttctgcttggaaagttc
atgaggaaggtgttttttggtcagctaagagccgcggaaatggagcacctcatcgagcgc
tcctggtacgctgtcactgagacctgtctggccttcactgtgttcagggatgacttctcc
ccccgcttcgtcgccctcttcaccctcctcctcttccttaagtgcttccactggctggcc
gaggaccgggtggactttatggaacgaagtccaaacatctcctgtgtgtttcacttgaga
gtattgtctctcattggactgctgggtgtcctggacttcctgtttgtccaccatgcctgt
caaagcatcattaccagaggagcctcagtccagctggtttttggattcgagtatgccatc
ctgctgactatggtgctgacgaccttcatcaagtacgttctgcacaccgttgacctacag
agtgagaatccctgggacaataaggccgtctatatgctctatactgagctcttcacaggt
ttcatcaaagtgctgctgtacatcgctttcatgaccatcatgataaaggttcacaccttc
cctctgtttgccattcgccccatgtatctggccatgaggcaattcaagaaagctgtaaca
gatgctataatgtctcggagagccattcgcaacatgaacacactataccctgatgctact
cctgaagatctgcaggcttctgacaatgtttgtatcatctgtcgagaggaaatggtcact
ggagccaagaaactaccttgtaatcacattttccactccagctgcttgcgctcctggttc
cagcgccagcagacctgccccacctgtcgaatggacgtcctcagagcttccaataacaat
cagactcctgccccagcccaggccccgccccctgcccctgcagcccctgccaacgcaccc
gcagccccgcctgctaatgtggctccaggcatgttaccaggcttcccacctggcatcttc
cctttctggggtcccttccctgcagtgcctcctcctcctgctgccgcggctgcagctgac
ggtcctggtgctactgatgctgcccaaagcagcacagaggcatctggtaccagtcagcct
tcatcatctactggtgatacctccacagcagcagctgctccaggatcagcaatcccaggc
tttcccttctccttccctcctcctcccttcccctccgctccgtggctgcccatgccacca
cctcctccctttgtgtcctcaatgccgccacctcctccgtctctgtcccggatgtccgag
gaggagctccgggagctggaggctgaaggccggcagggcctcgaggccagactccagtgt
ctccaaaacatccacaccctgctggatgccgccatgctcaacatccaccactacctcagc
accgtcgccaccctcactccacctcgggctgaaggcagcacaggagaagccagtgggaca
aaccactctgcttcatctgctgcagctggcagcagcacagagagtcagagccaggagaca
gactcaggacccagcttggatcaagtgaatggtgctacagtctcctctcaggccgctgat
tccacctctgctgcctcggaaacggaaagtaaagaaaacattgatgatgaagagttgctg
gaggatgcggtggaggtcgagggcggagaaccgaacgctgccgagctgaggcgccgccgt
cttcgtaagttggagtcggcatcatcgtcgtcatcaccccctccagacaactga
DBGET
integrated database retrieval system
