Hippoglossus hippoglossus (Atlantic halibut): 117769198
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Entry
117769198 CDS
T07778
Symbol
pcdh19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117769198 (pcdh19)
Cell adhesion molecules [BR:
hhip04515
]
Cadherins
Protocadherins
117769198 (pcdh19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Motif
Other DBs
NCBI-GeneID:
117769198
NCBI-ProteinID:
XP_034453827
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Position
10:19152343..19206847
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AA seq
1098 aa
AA seq
DB search
MQTKEMDLIQSIAVFVLLWVGAEAVINLKYGINEEMKPGSVIGNVTKDALKQGFQIAPQP
PYLRVISNSEPRWVELSPAGILTTQMKIDRDVVCRQNPKCVISLEVMSNSMEICVIKVEI
EDLNDNPPRFPTSHIDIEISENASPGTRFPLEGASDPDSGIFGVQSYSITPNELFGLEIK
TRGDGSKIAELVVQKSLDRETQSHYQYEISAEDGGDPPKIGAVQLNIKVIDSNDNNPVFD
ESVYTVNVMENSPINTLVIDLNATDPDEGNNGEIVYSFNSYVTEKTRDAFKIDPRSGIIT
VNGVLDYEATQIYEIDIQAKDLGPNSIPAHCKVTVNVMDTNDNPPVINLLSLNTEMVEVS
ENAQRGYVIALVRVSDKDSGANGKVQCRLQGNVPFRLQEYESFSTILVDGRLDREQKDTY
NLTIQAEDSGTPPLRAMKSLVVKVTDENDNPPHFLKPHYQEMVMENNLPGSCLLAVSAED
PDLGMNGTVSYSIVPGEIKHMDVNTYVSINPSGRIYSMRSFDHEYTRTFDFKVLARDNGN
PSLSSNATVRIVVLDVNDNTPVMTNPPLVNGTAEVSIPRNAGVGYMVTQVKADDYDEGEN
GRLTYTISEGDRAFFEIDQVNGEVRSTKMFGENAKSTYEITVVARDHGKPSLSASAYIVV
YLSPDLNAQEPIGPVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCSFFYL
RRVAEYSYGSQKKSSKKKKLSKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQSL
PLGCRRSESTFLNVENQNSRNAAPNHGYQHPFTGQSHQQPDLIINGMPLPETENYSIDAS
YVNSRAHLIKRPPCSTSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGHYVDTAVNDVLNM
TVPPNVCQLPDQDPSEGFHCQDECRILGHSDRCWMPRVQIPARAKSPEHGRNVIALSIEA
TTVDVPHYEDGTTKRTFATFGKDGPEDVERGEIKGKRTQESQVCSPKANGGAVREAGNGR
EAASPITSPVHLKSPLSKPSSAYNTLKCRDAERIANHSLLRQPEGKDSEPAVREINTLLH
DGRDKESPSSKRLKDIVL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaaggagatggatttaattcaatcaatcgccgtgttcgttttactttgggtc
ggggccgaggcggtcatcaacctgaagtatggaataaacgaggagatgaagcccgggtca
gtgattggaaacgtgacaaaggacgcgctaaagcaaggatttcagattgcaccgcagccc
ccatacttgagggttatttccaattcagagccgcgatgggtggaactgagtccagccgga
atccttacaacccaaatgaaaatagaccgggacgtagtttgtcgacagaacccaaagtgt
gttatttccctagaagtgatgtcaaactctatggagatctgtgtcatcaaagttgaaatt
gaggatttgaacgataacccgcccagattcccgacgagccacattgacattgagatttct
gagaatgcctcccctggtacgaggtttcccctagagggggcaagtgatccggactctggg
atctttggagtgcaatcatattccatcaccccaaatgagctgttcggactggaaataaag
accagaggggatgggtccaaaatagctgagcttgtcgtgcagaaatcattagacagggag
acacagtcacactaccagtatgaaatcagcgcagaagatggaggagaccctcctaagata
ggcgcggtccagttaaatatcaaggtaattgattctaatgacaacaaccctgtttttgac
gagtcagtgtatactgttaacgtgatggagaattcccccatcaatacattagtcatagac
ttgaacgcaacagatcctgacgagggcaataatggagagattgtgtactccttcaacagt
tatgtcacagagaaaacgagggacgcgtttaaaattgaccccagatcggggatcatcact
gtcaacggcgttttggattatgaggcgacgcagatatacgagattgacattcaggccaaa
gatttaggtcccaactccatcccagctcactgcaaagtcacagtgaacgtgatggatacg
aacgataacccacctgtcatcaatttactctcactgaacactgagatggtggaagttagt
gagaacgcacagcgtggatatgtcattgcgctggtgagggtgtcagataaggattctggg
gcaaatggaaaagtgcagtgcaggcttcagggcaatgttccgttcagactgcaagaatat
gaaagcttctccactatactggtggatggcagactggacagggaacaaaaggacacatac
aacctgaccatccaagctgaggacagtggcacccctcctttacgcgccatgaaatccctg
gtagtcaaagtcacggatgaaaatgacaaccctccccacttcctcaagcctcactatcag
gaaatggtgatggaaaacaacctccctggttcatgtctgctcgcagtatcggcagaagac
ccggacctggggatgaatggcacagtttcatactccatagtccctggtgagattaagcac
atggatgtaaacacatatgtcagcataaacccatcaggccgcatttactccatgagatca
ttcgaccatgaatacaccaggacttttgatttcaaagttttggccagggacaatggcaac
ccctctttgtcaagtaacgccacggtgcgtattgtggtgctggatgtcaacgacaacaca
cctgtgatgacaaacccccctctggttaacggcacagcggaggtctccatccccagaaac
gccggggtgggttacatggtgacccaggtgaaagctgacgactacgacgagggggagaac
gggcggctgacctacaccatctcggagggggaccgggctttctttgagatcgaccaggtg
aacggggaggtgcgctccaccaagatgtttggggaaaacgccaagtccacctacgagatc
acggtggtggcgagggaccacggcaagccctccctctccgcctcggcctacatcgtggtg
tacctctcgccagacctgaacgcacaggagcctattggaccagtcaacctgtccctcatc
ttcatcatcgctctgggctccatcgctgccatcctgtttgtcaccatgatttttgtggcg
gtgaagtgcaagcgggataacaaggagatccggacgtacaactgcagtttcttctacttg
cgcagggtggcagagtactcatatggcagccagaagaagtccagcaagaagaagaagctg
agcaagaacgacatccgcctggtgccacgagacgtcgaggagacagacaagatgaatgtg
gtgagttgctcgtctctcacctcctcgctcaactacttcgactaccaccagcagagcctg
ccgctgggctgcaggcgctccgagagcaccttcctcaacgtggagaaccagaactcacgc
aatgcagctcccaaccatggctatcagcacccgttcactgggcagagccaccaacagcca
gacctcatcatcaacggcatgccactgccagagacggagaattattccattgacgccagt
tacgtgaacagcagagcccacctcattaaaaggcccccatgtagcacgtcgacattcaag
gacctggaggggaacagtctgaaggacagcggtcatgaggagagcgaccagaccgacagt
gaacacgatgtccagagaggacactatgtcgacaccgctgtcaatgacgtgctgaacatg
actgtcccccccaacgtttgccagctgccagaccaagatcccagcgagggcttccactgc
caggacgagtgtcgcatcctaggccactctgaccgctgttggatgccccgtgtacagatc
ccagcgcgagccaaatcacccgagcacggccgcaatgtcatcgctctgtctatcgaggcc
accacagtggacgtgccccactacgaagatggcaccaccaagaggacttttgccaccttc
ggcaaggatgggcccgaggacgtggagcggggagagataaagggaaagcggactcaggag
tctcaggtgtgcagccccaaggcgaatggaggggctgtccgtgaagctggcaacgggcgt
gaggcagccagccccatcacctcccctgtgcacctgaagagcccactgtccaaaccgtcg
tctgcctacaacacacttaaatgccgcgacgcagagcgaatcgccaaccacagcttgctg
cggcagccggaggggaaggacagtgagccggctgtcagggagatcaacacgcttctccac
gatggccgagacaaggaatcccccagcagcaagcgcctgaaggacattgtgctttag
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