Hippoglossus hippoglossus (Atlantic halibut): 117769212
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Entry
117769212 CDS
T07778
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117769212 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117769212 (exosc1)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117769212 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
117769212 (exosc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
SPK
Motif
Other DBs
NCBI-GeneID:
117769212
NCBI-ProteinID:
XP_034453879
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Position
1:complement(9585423..9590416)
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AA seq
194 aa
AA seq
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MSPMKLCVPGDKLCSIEDCSPGTGVYQRHGYIYSSLAGYVLRKNEGGQLPVISVVRETEA
QLLPDVGAIVTCKVTSINPRFAKVQILYVGSTPLKDRFRGTIRKEDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPRTHTKE
FRKVARVQPEYLQA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgaagctgtgtgtaccaggtgacaaactatgcagcatagaagactgttct
ccaggcacaggagtatatcagcggcacggctacatctactcctcactagcaggctacgtg
ctcaggaaaaacgagggagggcagttacctgtgatctcagtggtgagggaaacagaagca
caactgctgccagatgtaggagcaatagtcacctgtaaggtgaccagcatcaacccccgg
ttcgccaaggtccagatcctctatgtaggctccacgccgctgaaagatcgcttcagaggg
actatcagaaaagaagatgtgcgtgcaacagagaaggacaaggtggagacatacaaaagc
ttcagacctggtgacatcgtcctggcaaaagtgatttctttgggtgatgttcagtcgaac
tacctgttgacaactgctgagaatgagctgggagtcgtggtggcacacagtgaagcaggt
gcccagatggttcccatcagctggtgcgagatgcagtgcccgcggacgcacaccaaagag
ttccgcaaagtggcacgagtgcagccggagtatctacaggcatga
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