Hippoglossus hippoglossus (Atlantic halibut): 117769226
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Entry
117769226 CDS
T07778
Symbol
gria1a
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor 1a
KO
K05197
glutamate receptor 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04080
Neuroactive ligand-receptor interaction
hhip04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117769226 (gria1a)
04082 Neuroactive ligand signaling
117769226 (gria1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117769226 (gria1a)
Ion channels [BR:
hhip04040
]
Ligand-gated channels
Glutamate (ionotropic)
117769226 (gria1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
117769226
NCBI-ProteinID:
XP_034453901
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Position
10:complement(9372070..9444930)
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AA seq
963 aa
AA seq
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MQRSLTILYTSLLGVCLGSSSSFPSNINIGGLFPIESHEYEVFRFALSHHQDIPKLVPQV
DMVRMGNSFSMTYAFCSQFSKGVYAIIGLYDRKTVNMLMSFCGALHVCFVTPSFPIETAN
QFVIQLRPELQDALVGVIDHYGWTKFVYMYSSDSGLSVLQKVLDTAAERNWLVTSVNVET
MTEASFLKVFQDLDKRKEGQIIIDCETERLTGILRKIVEQGKNAKSYHYILANLGFLDID
LTDLRKGGANITGFQLVNNSEPSVSRVVQQWLDFDNKDSKVHKSGLKYTGALTYDGVKVM
STAFQNLRRQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVRIDGLTGHIQFNEKGR
RTNYTVSVMELAPSGPKKVGYWNEDEKYVTTASFMRGSNETYGLQNRTYIVTTILESPYV
MLKKNHEQLVGNDKYEGYIVELAAEIAKHVGYQYKLKVVSDGKYGARDPDTKMWNGMVGE
LVYGKADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIW
MCIVFAYIGVSVVLFLVSRFSPYEWHAEDYEEGEPQSPTQASASNGVQQGQTQTQQNINQ
QNLDQTNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAA
FLTVERMVSPIESAEDLAKQTEIAYGTLDAGSTKEFFRRSKIAVFEKMWSYMKAADPSVF
VKTTDEGVMRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSPL
RNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGG
LGLAMLVALVEFCYKSRTESRRMKQSINDAMRCSTLTRMSGNGSGGENGRILTHDFPKTV
QTLPCMSHTASMGLGASGCDHHMTVLAARNGQGGVKEEHKTLRTSKIMAVHVDPSILLAV
NAL
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgaagcctcaccatcctctacaccagtttactgggggtgtgcttgggttcaagc
tcaagtttcccaagtaacatcaatataggaggattgttccccatcgaatcgcacgaatat
gaggtgttccgcttcgccctctcgcaccaccaggacatccccaaactggtgccgcaggtg
gacatggtcaggatggggaatagcttctccatgacatatgccttttgctcgcagttctcc
aaaggtgtgtatgccatcatcggcctgtatgacaggaagacggtcaacatgctcatgtcc
ttctgcggagcgctgcacgtctgcttcgtcacgccgtccttccccatcgagacggccaac
cagttcgtcatccagctgaggcctgagctgcaggacgctctggtgggtgtaatcgaccac
tacggctggaccaagtttgtctacatgtacagctcggattcaggcctgtcggtgctgcag
aaggttctggacacagcagcggagaggaactggctggtgacctcggtgaacgtggagacc
atgacggaggcctcgttcttgaaagtgtttcaggatctggacaagaggaaggagggccag
attatcatcgactgtgagaccgagaggctcactggcatcctcaggaagattgtcgaacag
ggcaagaatgctaagagctatcactacatcctggctaacctgggtttcctggacatcgac
ctgacagacctgaggaaaggtggggcgaacatcaccggcttccagctcgtcaacaactct
gagcccagcgtcagccgcgttgtccagcagtggctggactttgacaataaagactccaaa
gtgcacaagagtggactcaagtacactggcgctctaacgtacgacggggtgaaagtcatg
tccacggccttccagaatttaaggagacagaggatagacatttctcgcaggggcaacgct
ggcgagtgtctcgccaacccaccagccccctggggacagggcatagacatccagagagcc
ttgcagcaggtgcggatagacggattgacgggtcacattcagttcaacgagaaaggccgc
agaacaaactacactgtcagcgtcatggaactggccccatccggccccaagaaggtcggc
tactggaacgaagatgagaagtacgtgaccacggcgagcttcatgcgaggcagcaacgag
acgtacggcctgcagaacagaacctacatcgtcaccactatcttggagtcaccgtatgtg
atgctgaagaagaaccacgagcagcttgtgggaaacgataagtacgagggctacatcgtg
gagctggctgcagagatagccaagcatgtgggctaccagtacaaactcaaggttgtctca
gatggcaagtatggagccagagacccagataccaagatgtggaacggcatggtgggagaa
ctggtgtatgggaaagcggatgtggctgtggctcctttgaccatcaccctggtccgtgaa
gaagtcatcgacttctccaagccattcatgtccctcggaatctccatcatgattaagaaa
cccaccaaatccaagcctggtgtgttttcattcctcgacccgctggcttacgagatctgg
atgtgcatagtgtttgcctacatcggcgtcagcgtcgtcctcttcctcgtcagccggttc
agcccgtacgagtggcacgccgaggactatgaggaaggagagccacagtctcccacgcaa
gcttcagcctccaacggggtgcagcagggccagacacagacgcagcagaacataaaccaa
cagaatcttgaccagaccaatgagtttggcatcttcaactccctttggttttcactgggc
gccttcatgcagcagggatgtgatatctccccacgctctctgtcgggccgcatcgtcgga
ggcgtgtggtggttcttcacccttatcatcatctcgtcctatactgccaacttggccgcc
ttcctgacagtggagaggatggtgtctcctatagagagtgccgaggatttggccaagcag
acggagatcgcctatggaacgctggatgccggctccaccaaagaattcttcaggaggtct
aagatcgccgtgtttgagaagatgtggtcctacatgaaggcggctgacccgtccgtgttc
gtcaagaccacggacgagggcgtgatgagggtcaggaagtccaagggcaagtacgcctac
ctgctggagtccacgatgaacgagtacatagagcagaggaaaccctgcgacaccatgaag
gtgggggggaacctggactctaaaggttacggcatcgccacgccgaagggctctcctctc
agaaacccagtaaacttggcagtgttaaaactgaacgagcagggcctcttggacaaattg
aaaaacaagtggtggtacgacaagggcgagtgcggcagcgggggcggggactccaaggac
aagacgagcgctctgagcctcagcaacgtggcgggagtcttctacatcctgatcggcggc
ctgggcctggccatgctggtggcgctggtggagttctgctacaagtccaggaccgagtcg
cgccgaatgaagcaatccatcaacgacgccatgcgctgctccaccctgaccaggatgagt
ggcaacgggagcgggggcgagaacgggcgaatcctcacccacgacttccccaaaaccgtt
caaactctgccctgcatgagccacaccgccagcatgggtctgggtgcctccggctgtgat
catcacatgactgtgctggcggcgaggaacgggcagggtggggtaaaagaagagcacaag
actttaaggacctcgaaaatcatggctgtccacgttgacccatctattctcctggctgtc
aatgcgctctga
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