Hippoglossus hippoglossus (Atlantic halibut): 117769352
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Entry
117769352 CDS
T07778
Symbol
frmpd1b
Name
(RefSeq) FERM and PDZ domain-containing protein 1 isoform X1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hhip04990
]
117769352 (frmpd1b)
Domain-containing proteins not elsewhere classified [BR:
hhip04990
]
Other domain-containing proteins
FERM domain-containing proteins
117769352 (frmpd1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FERM_M
RA_2
PDZ_6
PDZ
FERM_C_FAK1
FERM_f0
DUF6288
Motif
Other DBs
NCBI-GeneID:
117769352
NCBI-ProteinID:
XP_034454109
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All DBs
Position
10:complement(16355735..16380139)
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AA seq
1719 aa
AA seq
DB search
MEEKERCRSRSPARRASRVQQVVGTIIRRTRESLSRERLLGDGRSQRSNSLSNQNFLAKL
TLQITRDPVLDSSTGHGFTLTTNAPLLVRDIAAGSPADGILFPGDQVLQINDTVLEDLST
EQVEDILRDLEDCITVTILRYMTNPKSSIMSAEKRARLRSNPVKVRFAEEVVVNGHTQGN
SLLFLPNVLKVYLENGQTKAFKFDNTTTVKDIVLTLKDKLSIRAIEYFALVLEQQYSITK
LLLLHEDELIQKVVQKKDSHDYRCLFRVCFIPKDPMDMLQDDSSTFEYLFLQSVGDVLRE
RFAVEMKCNTALRLAALHMHERLDSCGQTRTSIKSITKEFGLDSFISPTLLSNMREKDLR
KAISYHLKKIQSLLEPRHKVISGTQARVAYLTQLGELISYGGRSYSATMMLQDREVLVSL
LVGAKYGMSQIINHKLNVISTLVEFSSISRVELLSESDKVSLLRISLHDMKPFALLMDSL
AAKDLGCLLGGYCKLLVDPSVNVFRLGRPKVRVHRIPAEEGVCGMFAVVEGVCYESLSSY
VSRCCSDSDDSTDDDDPMDSQNYKRPDPASQDWEERRREEEEKRREEERKEREEYKGKQE
VKIIVTTEGKENEGEEEGGATGNALRKFGIMDEEMNLETPWYHTDPRVTSSFSSLSSSSL
SAALEESSTAAKAPSRTDALRGQRTVEDLPGLDVHHPFLLEPKRQQGPLRPTNLNYRGND
NSCLCFADLSKADFLPSPPEATSDDDDDDDEEDEEQGVEELRRISKIPSSRDLRMIDSTP
FERSPIRRKKKTPPKVPLRTSSIPGHKAGHAEQRLSKDEDSLFLTPSPNPKPALLVKDTV
SESEDEFFDAQERFTPPVPDLSDAELADRQNANRLSGTWNGVPTAPGKELSSPLTNKAQS
SKIKKEVEALKRPTNQLTNQHPSPPKSSQKPEVKVKPPLAPKPQLPPKPQIIPPKSPQHG
RSYAHCNGDASGRLSSELLEMEPDTMEFKSVTSGAGGLPLSSPLITAVRCSKQPPAITTP
HTEEKTKRQENSLKQNNDLTHENGAHVIYKNRANIPDKKETPKVESQTNGNSLSSKKPLD
LPPILLSNSGSKLAIPPPVPPKPTSPTNLHPLSLPASSPVSPTDPSKGIFKDSITTPNGI
LPWSSRNGTIQSGPRRVSLSHESLSPKNTDAQVTLTTSLTSTNSNDVRGLESREHGRSGS
GSDLRTSSSSLGGRLPASALRGRIQSLPWYMTRSQEILGTLDYPSTSSINGDTSGFGSGL
SVASGLSDLNKTPVKQKETVALKSGGKGTVLEDGAEVVIATIKEAQDVTSHMKRTNGTNG
SHPNLTIKENITHSGSVSSEQPQSRSHSAVGLGGVSSMQIGGDSPTSSLADSTPPEQHRE
ACGCRTVYANCFSGDTEDGVSFDEELTVYEFSRRTRPKPAQPGPVPSPPTPSPKPNILSL
LKDNPRPLSTFSTASSELSPLVSRPASPTTSFGGPLRSLTNRNYGGLKGGFASLHQDIEQ
LLLVLESGALEQPQQTLYQDSKQDIKVGPDLNHNGTEDSATTAAVSNCTGASSVTMTEAE
RTLLQAEARRLASGCQRATRVGWAPDEALRSLSNSFSALVQLSLACLRTKPCSGCDICHN
ASLVHGDEDDDSQEAMAKLKEIVGLYREFVGAVETAGTGAGGKRVGLSGAGLGQGESDGV
RLLAKRCTVLISSVFALTQLFRTHTLDSSETPGHVPLNF
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaggagcgatgtaggagcaggtctccggctcggagggccagtcgggtgcag
caggtggtgggaacaataatacgacgcacccgggagtcgctaagcagagagcggttgcta
ggtgatgggaggtcgcagcgctccaacagtctgtccaatcagaacttcctggccaagctg
acgctgcagatcaccagggacccggtcctggacagcagcactggacatggcttcaccctc
accacaaatgcacccctgctggtcagggacatcgccgcagggagtcctgcagatgggata
ctgttccctggggaccaggtactgcagattaatgatacagttctggaggatctgagcaca
gagcaggtggaagacatcttaagggacttggaggattgtatcactgtgactatcctgcgg
tacatgacgaatcccaagtcatccatcatgtcagcagagaagagagctcgtctgaggagt
aatccagttaaagtgcgctttgcggaggaggtggtggtcaacgggcacactcagggaaac
tctcttctcttcctgcccaatgtcctgaaagtctatttagagaacggacagaccaaggcc
ttcaagtttgataataccaccactgtcaaagacattgttctgaccctgaaggataaactg
tccatccgggccatcgagtacttcgccctggtgctagagcaacagtacagcatcaccaaa
ctgctgctgctgcacgaagacgagctcatccagaaggtggtgcagaaaaaagactcccat
gattaccgatgtttgttcagggtgtgtttcatccccaaagaccccatggacatgctgcag
gacgactcctctacctttgagtacctctttttacagagtgtcggggacgtgttgcgggag
cgttttgcagtagagatgaagtgtaacactgcactccgcctggcagcgctgcacatgcac
gagagactggatagctgtggacagaccaggacctctatcaagagtatcacgaaggagttc
ggcctggacagcttcatctctcccacgctgctgagcaacatgagggagaaggacctgagg
aaagccatcagctaccacctcaaaaagatccagtccctgctagagccacggcacaaggta
atatctggtactcaggctcgagtggcctacctcactcagctgggagagctgatttcatac
ggagggcgatcatactcagctacaatgatgctacaagacagggaggtgttggtcagcctg
ctggtcggagccaagtacgggatgagtcagatcatcaaccacaagctcaacgtgatctcc
acgctggtcgagttcagcagcatcagccgagtggagctgctctcggagtcggacaaagtc
agcctgctgcgcatctctctgcacgacatgaagccatttgccttactgatggactctctg
gcagccaaagacttagggtgtctgctgggaggctactgcaaactcctggtggatcccagt
gtcaatgtcttccgtctggggcgcccaaaagtgagggtgcaccgtattcctgctgaagaa
ggtgtgtgtgggatgttcgccgtagtagagggcgtgtgctatgaatccctatcaagttat
gtgtctcgctgctgtagtgactcggacgactcgacagatgacgacgacccgatggattca
cagaattacaaacgtccagaccctgcaagtcaggactgggaagaaaggaggagagaggag
gaagaaaagaggagagaagaagaaaggaaagagagagaggagtacaaaggcaaacaggaa
gtgaagataatagtgacaacagaaggtaaagaaaatgagggtgaagaggaaggaggagca
acgggaaatgcactgcgtaaatttggtattatggatgaggaaatgaacctggagaccccc
tggtatcacactgacccaagggtcactagcagtttctccagcttgtccagcagctccttg
agtgccgcactagaggagagcagcaccgcagctaaagccccatctcgcacagatgcactt
cgtggacaacgcacagtagaggacctacccggcttggacgttcaccaccccttcctccta
gagccaaaacgccaacagggccctctgcgacccaccaacctcaattatcggggcaatgac
aactcttgcctttgcttcgctgatctctccaaggccgatttcctgccaagcccgcctgag
gctaccagcgacgatgacgatgatgatgatgaggaggacgaagagcagggagtggaggaa
ctcagacgcatctccaagattcctagctcgagagatttgagaatgattgacagtacaccc
tttgaaagatccccaattagaagaaagaaaaagacaccgccgaaagtcccactaaggaca
agttcaattcccgggcacaaagcaggacacgctgagcagcgtctctccaaggacgaagat
agtctattcctgacaccttcaccaaaccctaaaccagctcttttggtcaaagacactgtc
tcagagtctgaggatgagttttttgatgcacaggagagatttactcccccagttcctgat
ctatcagatgctgaactggccgaccggcaaaatgctaatcggttgagtggaacctggaat
ggtgttccaactgccccagggaaagagctttcctccccccttaccaataaagcccaatcc
tctaaaataaagaaggaagtggaggcacttaaacggcccacaaatcagcttaccaaccaa
catcccagtccaccaaagtcatcacagaaacccgaagttaaagtcaaaccacctttggca
cctaagccccagctgcctcccaaacctcagatcattcctcccaagtccccccagcatggg
agatcatatgcccactgcaacggggatgcctctggacgtctgtcctctgaactcctggaa
atggagccagacaccatggagttcaagtctgtcacatctggggcgggcggactgcctctg
tcatcacctttgatcacagcagtgaggtgcagcaagcaacctccagcgatcacgacacca
cacactgaggagaagacaaagaggcaagaaaacagcttaaaacagaataacgatttgaca
catgaaaatggcgctcatgtcatctacaaaaacagagcaaacattcctgataaaaaggaa
acgccaaaagttgagagtcaaaccaatgggaattccctatcctcaaagaaaccactggac
ttaccccctatccttctctctaattcaggctcaaagctagctatcccccctccagtgccc
ccaaaacccacgtctcccactaatctccaccctttgtcactacctgctagctctcctgtc
tccccaactgatccaagcaaagggatcttcaaggatagcataactacgccaaatggaatc
cttccctggagcagccgcaacggcaccatccagtcaggaccgcggagggtctctctgagc
catgagagcctttcacccaaaaacacagatgcacaagtcacccttaccacatccctcacc
tcaactaactctaatgatgttcggggcctagaaagcagagaacatggaagatctggatca
ggatcggacctgaggaccagctcctccagcctggggggcaggctgccagcctctgccctg
agagggagaatccagtctctgccttggtacatgacccgttcacaggagattttgggaact
ttggactatccctccactagctccatcaatggagacacatctggatttggctctggtttg
tctgtcgccagtggtttatcagatttaaacaaaacccctgtcaagcaaaaagagactgtg
gccttgaaatcaggagggaaagggacagttttagaggacggagctgaggttgtcatcgcc
accatcaaagaggcccaggatgtgacgtcacatatgaaaaggaccaatgggacaaatggc
tcacaccctaatctcactattaaagagaatattacgcacagcggcagtgtctcatcagag
cagcctcagtcacggtcccactcagcagtaggattgggaggtgtgtccagcatgcaaatt
ggcggagactcacccacctcctcgctcgcagacagcactccaccagagcagcaccgggag
gcttgtggctgccgcaccgtttacgccaactgtttcagtggagacacagaggatggcgtt
agttttgatgaggaacttaccgtttacgaattctcccgccgcacgcggcccaaacctgcc
cagccaggacctgtcccttctcctccaacaccttctccaaaacctaatattttgtctctg
ctgaaagacaacccacgcccactctctactttctccactgcctcgtctgaactcagtccc
ttagtgtcacgaccagcttcccccacaacctcttttggtggtcctcttcgatcgctcacc
aacaggaattacggcgggctgaagggggggtttgcctccctacatcaagatatagaacaa
cttctgctggtgctagagagcggagcccttgagcaaccacaacaaacattatatcaagac
tcaaagcaggatataaaagtagggcctgacctaaatcataatgggactgaagacagcgct
accacagcagcagtctcaaactgtaccggggcaagctctgtcaccatgacggaggctgaa
aggactcttctccaggcagaagctcggcgactggcatccgggtgtcagcgggccacgcgt
gtcggctgggctcctgatgaagccttacgttcgttatccaacagcttcagtgctctggtt
cagttgtctttggcctgcctgcgaacaaaaccctgctctggctgtgacatttgccataat
gcgagtctggtccacggcgatgaagacgatgacagtcaggaggccatggcaaagctaaag
gagattgtgggtctctacagggagtttgttggggctgttgagacggcagggactggtgct
gggggtaagagggtaggcctcagcggggcaggactgggtcagggggagagtgacggggtg
aggctgctggccaaacgctgcaccgtgctcatctcctccgtattcgcactcacacagctc
ttcaggacacacacactagactcttcggagacgcctggccacgtacctctcaacttttga
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integrated database retrieval system
