Hippoglossus hippoglossus (Atlantic halibut): 117769453
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Entry
117769453 CDS
T07778
Name
(RefSeq) cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117769453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117769453
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
117769453
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
DHR-2_Lobe_C
Cnd3
Motif
Other DBs
NCBI-GeneID:
117769453
NCBI-ProteinID:
XP_034454234
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Position
10:complement(20873456..20891709)
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AA seq
1220 aa
AA seq
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MAAGESVWDSLDELEDFSDSDSDYEATIKTTKRRKHAVPGPQPPKRPRRKAALRATSSPH
NSPILAPVDPSLQQQQNSHGSSRQVSPRRARGVNERNPGISAEDIYDAVCLGKSAMVTVV
DEWLDSYKRSREVGLLVLINFIVRSCGCKGVVSREMLDRMQNAEIISSLTKEFNEDSVNY
PLCTPGPQLKHFKAGLCEFAKVLVRSCGNSLIYDEYLFPSLLALLTGLSDSQVRAFRHTS
TLLAMKLMTGLVEVAVIVSGQLQTTQRQHNMENSKSSDDRASDRLEELGATISELQEKRE
ELSSMMNATFRGVFVHRYRDRLTDIRVLCIEDLGMWLKIDPEDFLNDGCLKYVGWTLHDK
QSPVRLQCVRALQGLYQEKEFIGRLELFTSRFKERMLSMALDKDSDVAVDVVNLLLLIHQ
RTEEGLKEEECGHIYPLVYASHRGLAFAAGAFLYNKLKGLISSENQENERSDKAAFLQIL
ISFYTQSEFHEHGAYLVDSLWAVAGSELRDWETMTTFLLQEAGLTDQEEGALIELMMCAV
RQAAQSTSPVGRAQGKKHLSMKDKKIQEQDRRRITTHFIPLLPQLLTKFSADAWKVSRLL
KAPLYFNLDMYNSAQWLERHLDLLLSQVCGIVTKHTEATVLEACTYLACALCSDKYTFSS
RAHLAFSQLMDGLTECFNMYLSDLLQGSADDNDMYSAATALKRIAALCGAKDPTCWKLFD
PCVELLKSRLESGELDKELMVPALKCAAFHLMWAKVNAVNFKPAEAELKRLRREVRSFCR
VCQTCLSVNQAAVREQAFELLCDLLMLYSKSSVRSEPALQSLVHLPSDSLRSEMAAFLLD
YIFTDSEDHELNVEGEEERKIALLQRKRNQLAGYCKLVIYGVLDLSAATDVFKHYSKYFK
DFGDIIKETMSRSKLINPVLSAKTVCLSLQQLFSEMLTEEHSRRDLDEIRDLGKRLAMSF
GIDLHRVRKPLVALHMDGIRFAFRDPQEGEEQLPNVTFLEILSEFSFKLLQQDRAQMAAS
LKAECPSAAISWPPVRMYQQSLETRFTSRPREQQEEGGGAVFSHDIPVAKRKKTTAQGSV
SSATRGSWLDSSSLHSNLLTPALTSTVQRQPPRPLASRKPTAAVSDISSGLNELDSEDEF
SAGPQMRKVKPLKRRQLYSTMTSLDQQDLSSNLTLLSLIEDEEAEREEAEIENYDSDLET
GYTLPSTRHSSASHLDDLFD
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggcagctggagagtcagtgtgggacagtcttgatgagctggaggatttctcagactct
gacagtgattatgaggccacaataaaaaccaccaagcggagaaaacatgcagtgcctgga
cctcagccacccaagagaccaaggcgtaaagctgcattgagggcgacgtccagcccccat
aatagccccatcctcgctcctgtggacccctccctgcagcagcagcagaactcccatggg
tcatccaggcaggtctctcccagacgtgcgagaggagtgaatgagagaaacccgggcatc
agtgcagaggacatatacgatgcagtctgcttgggaaagagtgctatggtgacggtggtg
gacgaatggcttgacagctacaagcgaagccgagaggtggggctgctggtgctcatcaac
ttcattgttcggtcctgtggatgcaaaggtgtggttagtagagagatgcttgacagaatg
cagaatgctgagatcatcagttctctaactaaagagttcaatgaggattcagtgaactat
ccactgtgcactcccggcccccagctgaagcatttcaaagccggcctgtgcgagtttgct
aaggttctggttcgctcctgtggaaatagcctcatttatgatgaatacctcttcccctcc
ttgttggctctgctcacgggcttgtctgactcccaggtccgagccttcagacacaccagc
accctgcttgcaatgaagctgatgaccgggctggtggaagtagctgtgatcgtgtctggt
cagctgcagaccacccagcggcagcacaacatggagaacagcaagagttcggatgacaga
gcttctgacagactggaggagctgggggccaccatcagtgagctgcaggagaaaagagag
gagctctcctccatgatgaacgctaccttccggggtgtgtttgtgcatcggtaccgggac
cggctgactgatatacgggtgttgtgcattgaggacttgggcatgtggctgaaaatagat
cctgaagacttcctgaatgatggatgtctcaaatacgtggggtggaccctgcatgataag
caaagtccagtgcgtctgcagtgtgtgcgtgccctgcagggtctgtaccaggagaaagaa
ttcattggccgcctggagctttttaccagcagatttaaagagaggatgctcagcatggct
ctggacaaggactcagacgtggcagtggatgtggtcaatctgttgctgctgatccatcag
aggacggaagagggcctgaaagaggaggagtgtggccacatctatccccttgtttatgct
tcacaccgaggcctggcgtttgcagccggcgccttcctctacaacaaactgaaaggtttg
atttccagtgaaaaccaggagaatgaaagaagtgacaaggcagccttcttacaaatccta
atctccttctacacccagagtgagtttcatgaacatggagcgtacctggtggacagtctg
tgggctgtggcaggatctgagctgagagactgggagacgatgacaacgttcctgctgcag
gaggctggtctcacagatcaggaggagggggctctcatagagctcatgatgtgtgccgtc
agacaggcggcacagtcaacctcacctgtggggagagctcagggcaagaagcacctgagt
atgaaggataagaagatccaggagcaagacaggagacgtatcaccacacacttcatccct
ttactgccacagctactgaccaagttctctgcagatgcctggaaagtgagccgcctcctc
aaagctcctctctacttcaacctggatatgtacaacagcgctcagtggctggagaggcat
ctggacctgctgctgtcccaggtgtgtggcatcgtgacgaagcacacagaggccactgtt
ttggaggcttgcacctacctggcctgcgctctttgctccgacaagtacacattctcctcc
cgtgcacacctggcattcagccagctgatggacggcctgaccgagtgcttcaacatgtac
ttaagtgacctgctgcagggatctgcagatgacaatgacatgtacagtgcagccactgcc
ttgaagaggattgctgccttgtgtggcgccaaagacccaacgtgctggaagctgtttgac
ccctgtgttgagctgctgaagagcaggctggagtctggagagctcgacaaggagctcatg
gtgccggctctgaagtgtgcagcctttcacctgatgtgggccaaagtgaatgcagtcaac
ttcaaaccagctgaggctgaactgaagcgtctgaggagggaggtgcgttcgttctgcaga
gtctgtcagacgtgtctatcagtgaaccaggcggcggtcagagaacaggcatttgagctg
ctgtgtgacttgctaatgttgtacagtaagagttcagtccgctctgaacccgccctccaa
tccctggtccaccttccctctgattcgctgcgctctgagatggctgctttccttctggac
tacatcttcaccgactctgaagatcatgagctcaacgtcgagggtgaggaggagaggaag
atagcccttctccagaggaagcggaaccagctggcgggctactgtaagctggtcatctac
ggggtcctggacctctctgctgccactgacgtcttcaagcactacagcaagtactttaaa
gactttggtgacatcattaaagagacgatgagtaggagcaagctcatcaatcctgtgctg
agcgccaagaccgtctgtctgagcctgcagcagctgttctcagaaatgcttacggaggag
cacagcaggcgggatctcgatgagattagagacttgggcaagaggctcgccatgagcttt
ggcatcgatctccaccgtgtccgcaaaccactggtggccctacacatggacggaatacgt
tttgcgtttcgggacccgcaggagggagaggagcagctcccgaacgtgaccttcctggaa
atcctcagcgagttcagttttaagctgctgcaacaggaccgagcccagatggctgcgtcg
ctgaaagcagagtgtcccagtgctgccatctcctggccgccggtcagaatgtatcagcag
tccttggagacgcgcttcacctccagacccagggagcagcaggaggagggagggggtgct
gtcttctcacatgatattccagtagcgaagcgcaagaagaccacggctcaaggttcagtg
tccagcgctacaagagggtcgtggttggacagcagcagcctccacagtaaccttctcacc
ccggccctcacctccaccgtccagagacagccacccaggccactggcctccagaaaaccc
acagcagcagtgtctgatatcagcagcggcttgaatgagctggattctgaggatgagttc
tccgcagggccccagatgagaaaggtgaagcccctcaaacgacggcagctttactccacc
atgaccagtttggatcagcaagacctgagctccaacctcaccctgttgtctctgattgag
gatgaagaggccgagagagaggaggccgagatagagaattatgactctgaccttgaaacc
ggatacacactgccgtccacacgtcacagctcggccagccacctcgatgatctctttgac
tga
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