Hippoglossus hippoglossus (Atlantic halibut): 117769502
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Entry
117769502 CDS
T07778
Symbol
cul4b
Name
(RefSeq) cullin-4B isoform X1
KO
K10609
cullin 4
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03420
Nucleotide excision repair
hhip04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117769502 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
117769502 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117769502 (cul4b)
03400 DNA repair and recombination proteins [BR:
hhip03400
]
117769502 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhip04147
]
117769502 (cul4b)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
117769502 (cul4b)
DNA repair and recombination proteins [BR:
hhip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
117769502 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
117769502 (cul4b)
Exosome [BR:
hhip04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117769502 (cul4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_AB
Cullin_Nedd8
SecA_SW
DUF3292
Motif
Other DBs
NCBI-GeneID:
117769502
NCBI-ProteinID:
XP_034454317
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All DBs
Position
10:18836540..18847640
Genome browser
AA seq
878 aa
AA seq
DB search
MFPTGLSSPNPPPPPTQEARPAATDVKADSGNITSPKKRKINGSEREEAADTISPSPPKT
LNSSSSSSSSCCSPTALHIQKKLRFEDSVDFIGLDVKMAEEAAAAAAASCSNNKSKAGFL
PGGTGHHANGLTKSTGSGTFSNSKPGAAKKLVIKNFKEKPKLPENYTQETWQKLKEAVEA
IQNSTSIKYNLEELYQAVENLCSHKISAKLYKQLRAVCEDHIKAQIEQFREDSLDSVLFL
KKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKT
IDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYSAEGQRLMQ
EREVPEYLHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLSATLQKGLTHLLD
ENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKV
DHIIDICFMKNEKFINAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEKM
LDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLE
GMFKDMELSKDIMVQFKQNDEAGTRRMFKYMQCQNIPGNIELTVNILTMGYWPTYVPMEV
HLPAEMVRLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLM
FNEGEEFTLEEIKLATGIEDSELRRTLQSLACGKARVLTKVPKSKEIEDGDKFSCNDDFK
HKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLMSEVYN
QLKFPVKPADLKKRIESLIDRDYMERDKENSNQYNYVA
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttatcttcccctaatcccccaccaccgccaacccaggaggcaaga
cccgcggccactgatgtcaaggcggacagcggcaacatcacatccccgaagaagaggaaa
ataaacggctccgagagggaagaggctgctgacaccatctccccttctcctccgaagacc
ctgaattcctcctcctcctcctcctcctcctgctgctctcccactgcgctgcacatccag
aagaagttgaggtttgaggattcagtggatttcattggactggatgtgaaaatggctgag
gaggctgctgccgccgccgccgcttcatgctccaataacaaaagcaaagccgggttcctg
cccggtggaacggggcaccacgcgaacggactgaccaaaagcaccggctccggcaccttc
tccaacagtaaacccggtgctgccaagaaactagtcatcaagaacttcaaagaaaaaccc
aagttgccggagaactacacgcaggagacctggcagaagctgaaggaggcagtggaggcc
atacagaacagcacttcaatcaagtacaacctagaggagctctaccaggctgtggagaac
ctgtgctcccataagatttctgccaagctttacaaacagctgagggccgtgtgtgaagac
cacatcaaggcacagattgaacagttcagagaggattccctggacagcgtgctgttcctc
aagaaaattgacaagtgctggcaagatcactgcagacaaatgatcatgattaggagtata
tttttgtttttggaccgcacctatgttttacaaaactcaatgctgccatcaatctgggac
atgggtctggagctgttcaggttctacatcatcagtgatctgaaggtccagagtaaaacc
atcgacgggattctgctgctcattgagagggagcgaaacggagaggcgatagaccggagt
ctgctgaggagcctgctgagcatgctctctgacctgcagatttatcaagactcctttgag
cagcgcttcttggaagaaactaatcgcctgtactctgcagagggacagaggctgatgcag
gagagagaggtaccagaatatctccatcatgtcaacaaacgcctggaggaagaggccgac
agagtcatcacatatctggaccagagcacgcaaaaaccactcattgctactgtggagaag
cagttgctgggggaacatctcagtgcaactctgcaaaaagggctgactcatctgctggat
gagaacagaattcaggatctgtcgcttctctatcagctctttagtcgggtgcgaggtggt
gttcaggttctgctgcaacactggatagaatacataaaggctttcggaagcacaatcgta
atcaatcccgaaaaagacaaaaccatggtgcaggagttgctcgacttcaaggacaaggtg
gatcacatcatcgacatctgcttcatgaagaacgagaagtttatcaacgccatgaaggag
gcgttcgaaacattcatcaacaaacggccaaataaacccgcagagctcatagccaaacat
gtggattcaaagctacgagcaggaaacaaagaggcaacagacgaagagctggagaagatg
ctggataagatcatgattatctttagattcatctacggaaaagatgtgtttgaggccttt
tacaaaaaggatctggccaagaggttactggttggaaaaagtgcttctgttgatgctgaa
aaatcgatgttgtcaaagctcaaacatgagtgtggagcagcgttcaccagcaaactggag
gggatgttcaaggatatggagctttctaaagacataatggttcagttcaaacagaatgac
gaagccggaactaggagaatgtttaagtatatgcagtgccaaaacattcctggcaacatt
gagttgactgtcaacatcctaacgatgggctactggcccacctatgtcccaatggaagtg
cacctgcctgctgagatggtgcgactgcaagagatcttcaagaccttctacctgggcaaa
cacagcggcaggaagctgcagtggcaatcaacactaggccattgtgtcttaaaagctgaa
tttaaggagggcaagaaggagttgcaggtttcacttttccaaactcttgtgctactgatg
tttaatgagggagaggagttcaccctggaggagatcaaactagcaacaggaatagaggac
agtgaactgcgccggactctgcagtcacttgcttgtgggaaagcacgagtcctcaccaaa
gtccccaaaagtaaagagatagaagacggggacaagttttcctgcaatgacgacttcaaa
cacaagctcttcaggatcaaaataaaccagatccaaatgaaagaaacggtggaggagcaa
gccagcaccacagagagggtctttcaggatcgtcagtatcagattgatgctgcgattgtg
cggatcatgaagatgaggaagactctgagccataatctcttgatgtcggaggtgtacaac
cagctcaagttccccgtcaagcctgctgacttgaagaaaaggatagagtctcttatcgac
agggactatatggagcgtgacaaggagaactccaaccagtacaactatgtggcttaa
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