Hippoglossus hippoglossus (Atlantic halibut): 117769503
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Entry
117769503 CDS
T07778
Symbol
stx5a
Name
(RefSeq) syntaxin-5a isoform X1
KO
K08490
syntaxin 5
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117769503 (stx5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117769503 (stx5a)
Membrane trafficking [BR:
hhip04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
117769503 (stx5a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
BOS1_GOSR2_MEM11-like_N
Apolipoprotein
Use1
HrpB7
DUF16
Syntaxin
SEO_N
ABC-2_memb_rel
MCPsignal
Prominin
DUF2207_C
IZUMO
Motif
Other DBs
NCBI-GeneID:
117769503
NCBI-ProteinID:
XP_034454319
LinkDB
All DBs
Position
10:12955762..12962266
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AA seq
329 aa
AA seq
DB search
MTCRDRTVEFQSACKSLQGRQNGIQPSKPALSALRQRSDFTVMAKRIGKDLSNTFAKLEK
LTILAKRKSLFDDKAVEVEELTYIIKQDINSLNKQIAQLQDLVRSRGAPGGRHIQTHSNT
IVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSQPPVSSSPLMANNFRSRKKGAQ
EPHAAREPRNDYQGYTTSNLKESSVLMQDESRSLGDVAIDMGSQSNPMQLQLIDEQDSYI
QSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDANVEDTQLNVEGAHTEILKYF
QSVSSNRWLMIKIFLVLIVFFIIFVVFFA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgccgtgaccggaccgttgagttccagtcagcctgtaaatctctccagggcaga
cagaatggaatacagcccagtaaaccagcactcagcgctctcaggcagcgcagtgacttc
acagttatggccaagagaattgggaaagacctcagcaatacatttgccaaactggaaaag
ctcactatcttggcaaagagaaaatctctatttgacgacaaggcggtggaggttgaggag
ctaacgtacatcataaaacaagacatcaacagtctaaataaacagatagcacaactgcag
gacttggtgaggtcccgcggagctccgggtggtcggcatatccaaacccactctaacact
atagtggtgtcattacagtccaaactggcttcaatgtccaatgacttcaaatcggtccta
gaagtaagaacagagaacctgaagcagcagcgcagcaggagagagcagttctcgcagcct
ccggtctcgtcttctcctctgatggccaacaacttcaggagccgcaaaaaaggggcccag
gagccgcatgcagctcgtgagccacgcaatgactaccagggctatacaacctcaaattta
aaagagagctcagtcctgatgcaggatgagtcccggagtctgggggatgtggccatcgat
atgggctctcagtccaatcccatgcagctccaacttattgatgagcaggactcgtacatc
cagagccgtgcagacaccatgcagaacattgagagcaccattgtggaactgggctctata
ttccagcagctggcgcacatggtcaaagagcaagaggagacgattcagaggatcgatgca
aacgtggaggacactcagctgaacgtggagggcgcccacacagagatcctcaaatacttc
cagtcggtctcttccaaccgttggctgatgatcaagatctttctcgtcctcatcgtgttc
ttcatcatctttgtcgtcttctttgcctaa
DBGET
integrated database retrieval system
