Hippoglossus hippoglossus (Atlantic halibut): 117769588
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Entry
117769588 CDS
T07778
Symbol
gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04080
Neuroactive ligand-receptor interaction
hhip04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117769588 (gabra4)
04082 Neuroactive ligand signaling
117769588 (gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117769588 (gabra4)
Ion channels [BR:
hhip04040
]
Ligand-gated channels
GABA-A
117769588 (gabra4)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
CytochromB561_N
FAM199X
Motif
Other DBs
NCBI-GeneID:
117769588
NCBI-ProteinID:
XP_034454473
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Position
10:7047320..7067803
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AA seq
557 aa
AA seq
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MVSAKKKEMVTAATRPAFIRTLFYFFCLATCVKKGSGQTKKDERIYPENFTRILDRLLDG
YDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLMYEGPIEILR
LNNLMVTKVWTPDTFFRNGKKSVAHNMTAPNKLFRIMKNGTILYTMRLTINAECPMKLVD
FPMDGHACPLKFGSYAYPKTEVIYTWTKGPQHSVEVPPESSSLVQYDLIGQTVSSETIKS
ITGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLT
MTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTQTQIERAKKKPAKC
PPVPQTTPVKVKDTEEVLQLNPDTNGNLRKRMHYIAHLEACSHQRAQSTTSISGVGRARP
QRPLASGANGSSSTLSRSSPKSESLLSVASSSAQLVKSTPQAAASTPDVMAGTPCKQNTS
STSLQHLLVPKLERIQMMGNKLEPKQTPCSQPTTAGMGGTSKIDKYARILFPVSFGAFNM
VYWVVYLSKDTAVDTGG
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgccaagaagaaggagatggtgacagcagcgacgcgtcccgcttttattcgg
accctcttctactttttctgtttggcgacttgtgtaaagaaaggctctggtcagaccaag
aaggatgagaggatctatccggagaattttacgcgcattttagaccgacttctggacgga
tacgacaacaggcttcgacctgggtttggaggtcctgtgactgaagtcaagacagatatt
tatgtgacaagttttgggcctgtttcggatgttgaaatggagtacacaatggacgtattc
ttccgtcagacgtgggtcgaccggaggttgatgtatgagggcccgattgagattttaagg
ctcaacaacctgatggtgaccaaggtgtggacaccagacacgttcttcaggaacggcaag
aagtccgtggctcacaacatgacggctcccaacaagctcttccgcatcatgaagaatggc
accatcctctacaccatgaggttgacgatcaatgccgagtgtcccatgaagctcgtggac
ttccccatggacggacacgcatgcccgctcaagtttggaagttatgcctatcccaaaacg
gaagtgatctatacttggaccaaagggcctcagcattcggtggaggtgccccccgagtcc
tccagcctcgttcagtatgatctcatcggacagacggtctccagtgaaaccatcaaatcc
atcaccggtgaatatgtggtgatgacggtctacttccacttgaaacgcaaaatgggctac
ttcatgattcagacgtatatcccctgcataatgacagtaatcctctcccaagtgtccttc
tggataaataaagaatcagtcccggcacgcacagtcttcggcatcaccactgtcctgacc
atgacgacactcagcatcagcgctcgccactcccttcccaaggtctcatacgccactgcc
atggactggttcatcgctgtctgctttgccttcgtcttctctgccctaattgagtttgct
gctgtaaactacttcacccaaacgcagattgagcgggccaaaaagaagccggccaaatgt
cccccggttccgcaaaccacgcctgtcaaggtcaaggacaccgaggaagtgctgcagcta
aaccctgacaccaacggcaacctgagaaagcggatgcattacattgcccacctagaggca
tgcagtcaccagagagcccagtccaccaccagcatttcgggagtgggaagagccagacct
cagcgacctttagccagtggcgccaacggcagctcctccaccctctcccgctccagcccc
aagtctgagagcctgctcagcgtggcgtcctcctcggcccagctggtgaaaagtacgccc
caggctgctgcttccacgccagacgtgatggcggggaccccgtgcaaacagaacaccagc
tccacgtcactgcagcatctgctggtccccaagctggagcgcatccagatgatggggaac
aagctggagcccaagcagacaccgtgctcccagcccaccaccgctggtatgggtggaacc
agcaaaattgacaagtacgcacggatcctgttcccggtgtcatttggggcatttaacatg
gtctactgggtggtttacttatcaaaggacacagcggtggatacaggtggttag
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