Hippoglossus hippoglossus (Atlantic halibut): 117769653
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Entry
117769653 CDS
T07778
Symbol
ctnna1
Name
(RefSeq) catenin alpha-1 isoform X1
KO
K05691
catenin alpha
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04520
Adherens junction
hhip05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117769653 (ctnna1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117769653 (ctnna1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hhip04812
]
117769653 (ctnna1)
Cytoskeleton proteins [BR:
hhip04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117769653 (ctnna1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
GIT1_C
Motif
Other DBs
NCBI-GeneID:
117769653
NCBI-ProteinID:
XP_034454609
LinkDB
All DBs
Position
10:complement(10376142..10447598)
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AA seq
906 aa
AA seq
DB search
MTTINTANINFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNSSNKGPSNKKKGRSKKAHV
LAASVENATQNFLEKGEKIAKESQFLKDELTAAVEDVRKQGESMRQSSGDFSEDPCSSVK
RGNMVRAARALLSAVTHLLVLADMSDVYKLLLQLKLVEDSLVKVRNAGTEQDLGIQYKAL
KPEVDKLNMMAAKRQQELKDVQHKDQMAAARGVLQRNIPMLYTASRACLQHPDVAAYKAN
RDLIYKQLQHAVSGISNAAQATASEDSALNHPAGGGELAYALNNFDKQIIVDPLAFSEER
FRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNSVRQALQDLLSEYMGNAGRKDR
SDALNTAIDRMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYA
QVFREHANKLIEVANLACSISNNEEGVKLVRMAASQLEVLCPQVINAALALAAKPNSKVA
QDNMDLFKEQWEKQVRVLTDAVDDITSIDDFLCVSENHILEDVNKCVIALQEKDVDGLDR
TAGAIRGRAARVVHVVTCEMDNYEPGIYTEKVLEATKLLTNTVMPRFTEQVECAVEALSS
NPSQPVDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTED
DQLIAGQSARAIMAQLPQEQRAQIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMC
MIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADNCPDSTCKQDLLAYL
QRIALYCHQLNICSKVKAEVQNLGGELVVSGLDSAMSLIQAAKNLMNTVVSTVKASYVAS
TKYQKSKGMESLNMPAISWRMKAPEKKPLVKREKQDDQTNRVKRSSQKKHINPVQALSEF
KAMDSI
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccatcaacacagcaaacatcaactttaaatgggatccaaagagtctggagatc
cgcactcttgcagtggagaggctgcttgagcccctggtcacccaggtaaccacattggta
aactccagcaacaaaggtccgtctaacaagaagaagggacgctcaaagaaggctcatgtt
ttggctgcttcagtggaaaatgctacccagaacttcctggagaaaggagaaaagattgca
aaggaaagtcagttccttaaggatgagctgactgcagctgtggaagatgtccgcaagcaa
ggtgagtccatgcgccagtcttctggagatttttcagaagacccctgctcttctgtgaag
aggggtaatatggttcgtgctgccagagccctcctgtcagcagttacacatctgttggtg
ctggctgacatgtctgatgtctacaaacttctgctgcaactgaaactggtggaggacagt
ctggtgaaagtgcgtaatgcaggaacagaacaggacctgggaatccaatataaagccttg
aaaccagaggtggacaagctgaatatgatggctgccaagagacaacaggaactaaaggac
gtccagcacaaggaccaaatggctgctgctcgtggggttctccagaggaacatccccatg
ctgtacacagcatcccgtgcctgcctccagcaccccgacgtggcagcctacaaggctaac
cgtgacctcatctacaaacagctgcagcatgcagtctctggaatctccaacgccgcccag
gccaccgcatctgaggactcagcactcaatcatccagcagggggtggagagcttgcctac
gccctcaacaattttgataaacaaatcatcgtggaccctctggcgtttagtgaggagcgt
ttccgtccctccctggaggagcgccttgagagcattatcagtggtgctgccctcatggcc
gactcatcttgcacacgtgatgaccgcagggagcgtatcgtggccgaatgcaattctgtg
cgccaggctcttcaggaccttctgtctgagtatatgggcaacgctggaaggaaggacagg
agtgatgctctgaacacagccatcgacaggatgacaaagaaaaccagagaccttcgcaga
cagctgcgtaaagctgtaatggaccatgtctccgactcttttttggagactaatgttccc
cttttggtcttgatcgaagctgcgaagaacggcaacgagaaagaagtcaaggaatatgca
caggtgttccgcgagcatgccaacaagctgatcgaggttgccaacctggcatgctccatc
tcaaacaatgaggagggagtgaaactggttcgcatggcagcatctcaactggaagttcta
tgcccacaggtgattaatgcagcgttagcccttgctgccaagcccaacagtaaggtggcc
caggacaatatggatttgttcaaggagcagtgggagaagcaggttcgcgtcctcactgat
gctgttgatgacataacatccattgatgacttcctttgtgtgtctgagaaccacatcctg
gaggatgtgaataagtgtgtcatcgcactgcaggagaaagatgttgatgggttggatcgc
actgccggggcgattcgaggccgagctgcaagagtcgtccatgtggtcacttgtgaaatg
gacaactatgaacctggaatctacacagagaaagtgttggaggccaccaagctcctcact
aacacagtcatgccacggttcaccgagcaagtggagtgtgcggtggaggccttgagttca
aatccttcacaacctgtggacgagaacgagttcattgacgcatcccgtctggtgtatgat
ggcattcgcgacatccgcaaggctgtcctcatgatccgaactccagaggagttggacgac
tccgactttgaaacggaggactttgatgttcgcagcaggaccagcgtgcagacagaggat
gaccagcttattgctggccagagtgcacgggctatcatggcccagttgccccaggagcag
agggcgcagattgcagaacaggtggctagcttccaagaagagaagagcaagctggatgcc
gaggtatccaagtgggatgacagcggcaatgacatcattgtgttggccaagcagatgtgc
atgatcatgatggagatgacagacttcaccagaggaaaagggccactgaagaatacgtct
gatgtcatcagcgctgccaaaaaaatcgcggaggcaggatcaaggatggacaagctgggc
cgcaccatcgctgacaattgccccgactctacctgcaagcaggacctgctggcttacctg
cagcgtatcgccctgtactgtcaccagctgaacatctgcagcaaagtcaaggccgaggtt
cagaacctgggaggagagctggttgtgtcggggctggacagcgccatgtcactcatccag
gctgcaaagaacctgatgaacacagtggtgtccaccgtcaaggcctcctacgtggcatcc
actaagtaccagaagagcaaaggcatggagtccctcaatatgccggccatctcctggagg
atgaaagctcctgagaagaagcctctggtgaagagagagaagcaggatgaccagaccaac
agagtcaagagatcctcgcaaaagaagcacatcaaccccgtgcaggctctgagcgagttc
aaagccatggatagcatctag
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