Hippoglossus hippoglossus (Atlantic halibut): 117769685
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Entry
117769685 CDS
T07778
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
117769685 (shoc2)
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Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_13
LRR_9
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
117769685
NCBI-ProteinID:
XP_034454670
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Position
1:10934181..10946829
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AA seq
582 aa
AA seq
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MSSTLGKEKDSKEKDPKGGPAGKEREKETKALAGLVKDGGKESKTKGKDAKEGKKDTSSS
TPGVAFSVDNTIKRPNPAAGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPTSIK
ELTQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKMLRMLDLRHNK
LREIPAVVYRLMSLATLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCSL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIP
RSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VCGLVSLEVLILSNNLLKKLPHSIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggcaaagaaaaagattcaaaagaaaaggaccccaaaggtggtcca
gcagggaaagaaagggaaaaggagaccaaggctctggccggtttggtcaaggatggaggc
aaagaatcgaagaccaaagggaaagatgccaaagaaggaaagaaggacaccagcagttca
acaccgggtgttgccttctcagttgacaatacgataaagcggccaaacccggcagcaggt
actcgcaagaagtccagtaatgccgaggtgatcaaagaacttaacaagtgcagggaggag
aactcaatgagactggacctatctaaacggtccattcatatgctacccacttccatcaag
gagttgacgcagctcgctgaactctacttatacagcaacaagctgcagagcctgccagct
gaggtgggttgcctgtcaggcttggtcacactggccctgagtgagaactccctgaccagt
ttacccgactccctggactcccttaagatgcttcgaatgctcgacctgcggcacaacaag
ctgagagagataccggctgttgtctaccggctgatgtctctggccacgctgtacctgcgc
ttcaaccgcatcacaacagtagagaaggacatcagaaacctgtccaagctcactatgctc
agcatcagagagaacaagattaaacagctgcctgcagagatcggggagctttgcagcctt
attactctagatgttgcccataaccagttggaacacttaccgaaagagattgggaattgc
acacagataaccaacctcgacctgcagcacaatgagctcttggacctaccagagactata
gggaatctggccagcataaatcgcttgggtctgagatacaatagattatcagccatcccc
agatcattagccaaatgtcgagaactggaggagctaaaccttgaaaacaacaacatttca
gtgttgccagagggcctgctttcaagtttggtcaacctgacgagtctaacactggcgagg
aactgcttccagtcttaccctgtgggtggaccatcccagttctccaccatctactccctc
aacatggagcacaacagaatcaataagataccttttggtatcttctccagggccaaagtg
ttaagcaagcttaacatgaaggacaaccagttaacatctctgccactggactttggcaca
tggacgagcatggttgagctcaacctggccacgaatcagctgacaaagatccctgaggac
gtctgtggtctcgtctctctagaggtgttaatattgtccaataatcttctcaagaagtta
ccacatagtattggaaatttgaggaagctacgagagctcgacttggaggaaaacaagttg
gaatctctgccgaatgaaatcgcttatcttaaagatttacagaaattggtgttgacaaat
aatcagctgactacgttacccagaggcatcggccacctcaccaacctgactcacctgggt
ttgggagagaacctgctgcaacaccttcccgaggagattggtacactggagaacctggag
gaactgtacctcaacgacaaccccaacctgcacagcctcccgttcgagctggccctctgc
agcaagctgtccatcatgagcatcgagaactgtcccctcagccacctgcctccgcagatc
gtggcgggaggcccctccttcatcatccagttcctcaagatgcagggaccgtaccgtgcc
atggtctga
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