Hippoglossus hippoglossus (Atlantic halibut): 117769742
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Entry
117769742 CDS
T07778
Name
(RefSeq) uncharacterized protein LOC117769742 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117769742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117769742
Membrane trafficking [BR:
hhip04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
117769742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
117769742
NCBI-ProteinID:
XP_034454745
LinkDB
All DBs
Position
10:complement(20428250..20440154)
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AA seq
1441 aa
AA seq
DB search
MMSLIDLDDDQRWVPTHVNVTVLRARGLRTKGKHGSRYLYTIIQVGKEKYTTGLVEKAAL
PEWSEECCFELLPGILEDGGRSAYPPGSGDLVLTVMHRVLIGLDVFLGQTIIPLDQIFQE
GMCPRDEWFKLNSKAGRKEKERGELQVTVQFTRNNMTASMFDLTIKDKPRSAFGKLKDRV
TGRKRGDVESSSAIVPGRFAALSGSLGQPFGEGGGGVVVMESRDVAVAEEKRSKVKDFFK
GKLRKSSDTRSCSSLASDSSLSSMASDNPGPPPSLDLLSDPPSSPIYTSKVRVDAHYGEA
DLAKKVLTSQHTTKVLTHKRALSDEASKITTALSRSNVAMESLRGQTMTQSKSSLCINGS
HVYDSEPSTPKSSGALSSKLVLQEKCSPLSRSLQNLTKRSEDKGSFAEGRRWSFDKTRKD
EEKEARASFPPTQQAQTDGRTTQAAAPTVSSASSSPEKGRKLRKTLFSGGRSESLPAKSD
LNQAASSSEGRLRGWFGSGDSQNKPRLEVSPKVESSSDVPPPLPPLSPAPPQYSSPSGHV
SPDDRTQSRPLTPSTSPSSAPISPSNPFLPQMQRNPFFEELLAEESQTSPPLAPCSPSSG
LSPFHYTTLPCAPSPAHDAHATKMASIRRERPRPVGRQISLPALLPKAATPNSHNHASRS
MSESAGEWDDFFDALASSRLNSPTGSVPQKRLRTSPSFDTCSYAVNNHAQGLQTCEEQPP
PLPPRRLLRTTLSEIYSDGWLHRGQELAVHKEAYLLSQTGVASLQHGREAECKRNGSSPD
PQTSSETSDSPSVPSEQRADATSPGLVPEEKQKKFKYEPLEYDADCWGGMLFEQDLYGRM
CRGNYGKLTANNHRLPLNTEESDGTNITFKISAPEMLLDSEISVKDVMNLPTTTSPGPDV
KMDGPSAPVEAVAESKTNDTTCTNNNVSFLSGDLNMNVNNLDFTFIDSDGSSQSEAVDTL
KGVSSLGAISPQQTEDSLTVYHAETAPEDLFTLKDTYIPEMNSSFEINASSKRCKVSPAL
QDCHWELNNLLPRDQSRANDSGEIAALSSQNQTSSDLHVEFRDDKTRNNGNSQKTQKDID
DNGNPEAQLASHQQTEVFSGVVSARFRPKGLSRQSSCSSPSSQSQSGDREFEQLLSLVQN
ISQVGNGQLLYQPSKSSTDLPVNSTGRPKTSKVNKMSLLTKYCVTGIPSEVSFEDLHAKV
APSSRSPTKPDPSPYSTPFAPSLSNATTTANDTQAKLHPTPLCCPPIHLSSMGPGAGAST
TLVVAPYTSTTSSSFSTTFATDPPLVDARHSLFPEETQPANNLPRQESRPHPVKPLTSSQ
SEKKEGRSVLEKLKSTIHPGRGAAHLAAAEAERSQEVPVDNSAQYQHLTNMELISLLLQQ
EMDMQKQQAASERQEAQLGKCEGELKKVKAQMRDLEDYIDNLLLRIMEQTPTLLQVRTRH
K
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcactgatcgacctggacgacgaccagcgctgggtgcccacccacgtgaatgtc
accgtgctccgggcgagggggctgcgcaccaagggcaagcacggcagccgctacctgtac
accatcatccaggtggggaaggagaagtacaccacggggctggtggagaaggcggcgctg
cccgagtggagcgaggagtgctgcttcgagctgctgcccgggatcctggaggacggcggc
cgcagcgcgtacccgccaggcagcggggacctggtgctcaccgtcatgcaccgggtcctg
atcggactggatgtgttcctcggtcaaaccatcatcccgctggaccagatcttccaggag
ggcatgtgtcccagagacgaatggttcaagctcaactccaaggcaggaaggaaggagaag
gagcgtggtgaacttcaggtaacggtgcagttcacccgcaacaacatgacggccagtatg
ttcgacctcaccatcaaggacaaacctcgctctgcctttgggaagctgaaggatcgcgtc
acggggaggaagaggggggatgtggagtcttcctcggccatcgtgccgggccgcttcgcc
gccctgtccggatccctggggcagccgttcggagaggggggcggaggagtggtggtgatg
gagtctcgagacgtggcggtagcagaggagaagaggagcaaggtgaaggatttcttcaaa
gggaagctgcgcaagtcgtccgacaccaggtcgtgctcatcgctggcttcagacagcagt
ttgtcttccatggccagtgacaaccccggccccccacccagtctggatctgctgtcggac
ccccccagctcgcccatctacacaagcaaagtgagagtggacgcccactatggagaggca
gacttagctaaaaaagttctcaccagtcaacacaccacaaaggttctcacacacaagcga
gccctgagcgacgaagccagcaaaatcacaacggccctctctcgatcaaacgttgcgatg
gagtctctcaggggtcagaccatgactcagtccaagtcgtccttgtgtataaatggaagc
cacgtctacgactccgagccatcgactccaaagagctcgggagcgctgtcgtccaagctg
gtgctgcaggagaaatgctccccgctgtctcgctccctgcagaacctcaccaagaggagc
gaggacaaaggctcctttgccgagggccgccgctggtcattcgacaagacgaggaaagac
gaagaaaaggaagctcgggcatcgtttcctccaactcagcaagctcagacagacggtcgc
accacgcaggcggcggcgccgaccgtctcctctgcgtccagttcacctgaaaaagggagg
aagctgaggaagacgttgttctctggagggaggagtgagtctcttcccgccaagtcggac
ctgaaccaggctgcttcatcatcggaggggaggctcagaggctggtttggctccggcgac
tcccagaacaagccgaggctggaagtttctcctaaggtagaaagcagctcagacgtaccc
cctcccctccctcctctctcccccgctccccctcagtactcctccccctctggtcacgtc
tcacccgacgaccgcactcagtctcgcccgctcactccctccacctcaccctcctcggct
cccatctccccctccaaccctttcctcccccaaatgcagcgcaaccccttctttgaggag
ctcctagccgaggagtcgcagacgtcccctcctcttgcaccttgctccccctcctccggc
ttgtcccccttccattacaccactctgccctgcgcacccagccccgctcacgatgctcat
gctacaaagatggcttccataaggagggagcgaccccggccagtgggcagacagatatct
ctccctgcgttgttacccaaagcagccacaccgaactcccataaccacgcctctcgctcc
atgtccgagagcgcaggagagtgggatgacttttttgatgctcttgcctcgagcaggctg
aactcgcctacaggaagtgttcctcagaaacggctgagaaccagcccgtcatttgataca
tgtagctatgcagttaataatcatgcacaagggctgcagacgtgtgaagagcagcctccg
cctttgcctccgaggaggttgttaagaactacactcagtgagatttactctgacggctgg
ctgcacagaggtcaggagctggccgtccacaaagaggcctacctcctctcacagaccggc
gtggcctcgctacaacatggacgagaggccgagtgcaaaagaaacggttcatctccggac
cctcagacgagcagcgagacctccgactcccccagcgttccctccgagcagcgagcagac
gccacgtcaccgggattagtccccgaagagaagcagaaaaagttcaaatacgagcctttg
gaatacgacgctgactgctggggagggatgctgttcgagcaagatctgtacggacgcatg
tgcagaggaaactacggaaaactcacagcgaacaatcatcgtttgccattgaacactgag
gaaagtgatgggactaacatcacgtttaagatctctgcacctgaaatgcttcttgacagt
gaaatctctgtgaaagacgtcatgaacttgccaactacgacttccccaggcccagacgtg
aagatggatggtccctctgctccggtagaggcggtagcagagtctaaaacaaacgatacc
acttgcaccaacaataacgtgtctttcttgtcaggagacctgaacatgaatgtgaacaac
ttagacttcacttttattgactctgacggctcctctcaatcagaggcggtcgatactctc
aaaggcgtcagtagtttaggagccatttccccacaacagacagaagattcactgactgtt
taccacgcggagacggcacctgaggatttattcactttaaaggacacctacatacctgag
atgaactcttcgtttgaaataaacgcttccagtaaacggtgcaaagtgtctccagctctc
caggactgccactgggagctgaacaacttgttaccacgtgatcagtccagggcaaacgac
agcggagagatcgctgcgctgtcgtcgcaaaatcaaacatcatccgatcttcacgttgaa
ttcagagacgataaaacaagaaacaacggtaattctcagaagactcagaaggacattgat
gataatggtaacccagaagctcagctggcctcacatcagcagaccgaggtgttttccgga
gtggtcagcgcacgttttagacccaaaggtttgtcccgacagagcagctgcagcagcccg
agcagccaaagccaaagtggagacagagagtttgaacagttgttgtctctcgttcaaaac
atctcacaagtcggtaacggacaattgttgtatcagcccagtaaatcttccacagatttg
ccagtaaatagcaccggtcggccgaaaacatcaaaagtcaacaaaatgtccctcctcacc
aagtactgtgtcacaggtattccctctgaggtcagtttcgaagacctccacgctaaagta
gcaccaagctcaagatcccctactaagcctgatccctctccttactccaccccctttgca
ccgtccctgtccaacgccaccaccaccgccaatgacacacaggctaagctccaccccacc
cctctctgttgcccccccatacatctctcaagcatggggcccggtgctggagccagcact
acgctggttgtggccccctacacctccaccacctcttcctccttctctaccaccttcgcc
actgacccgcccctggtcgatgcacgccactcacttttccctgaggagacacagccagct
aacaacctgccccgtcaggagagcagaccccacccagtgaagccattaacctccagccaa
tcagagaagaaggaggggcgttcggttctggagaagctcaagtccacgatccaccctgga
cgcggcgccgcccacctggccgcagctgaagctgagaggagtcaggaggtgcctgtggac
aactcagctcagtaccagcacctgaccaacatggagctgatctccctgctgctgcagcag
gagatggacatgcagaagcagcaggcggcctccgagcggcaggaggcgcagctggggaaa
tgtgagggcgagctgaaaaaggtcaaggcacagatgcgagacctggaggactacatcgat
aatctgctgctgcggatcatggagcagacgcccacgttgctgcaagttcgaaccagacac
aagtga
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