Hippoglossus hippoglossus (Atlantic halibut): 117769753
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Entry
117769753 CDS
T07778
Symbol
gabra6a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6a isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04080
Neuroactive ligand-receptor interaction
hhip04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117769753 (gabra6a)
04082 Neuroactive ligand signaling
117769753 (gabra6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117769753 (gabra6a)
Ion channels [BR:
hhip04040
]
Ligand-gated channels
GABA-A
117769753 (gabra6a)
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
117769753
NCBI-ProteinID:
XP_034454759
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Position
10:12453792..12462238
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AA seq
451 aa
AA seq
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MRPRMAVLTLPLVTFLCWMSLGSVSANEKIYSENITRILDRLLDGYDNRLRPGSGGGLTE
VKTDIFVTSFGPVSDVDMEYTMDMFFRQMWVDERLKFEGPYEILRLNNRMVDKIWTPDTF
FRNSKKSISHNMTTPNKLFRIMQNGTVLYTMRLTISAECPMSLINFPMDGHACPLRFGSY
AYTRSEIIFTWKKGPVASVDCPKESMSLLQYDLVGQTLSSEIFKSNTGHYSVQVIHFHLQ
RKLGYYLIQTYIPLIMVVVLSQVSFWINKESVPARTVAGITTVLTMTTLSISARQSLPKV
AYATAMDWFIAVCFAFVASALVEFAAVNYFATLQANRLKRRKARQDKLEVLATGSDDDDT
VSQSDSSPREGLKRRNHSVCRSEPGEAPPVPIFLQQGSAFPQIPQLAGTSPIDKHARILF
PLTFALFNLVYWFIYLGQDNMESARDMDLKN
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgacccaggatggctgttctgacattacctttggttacttttctctgctggatgagc
cttggtagtgtaagtgcaaatgagaagatttactcagaaaacatcactcgcattttggat
cgacttttggatggctatgacaacagactgcgtcctggatctggaggtggtttaacagag
gtgaagacagacatctttgtcaccagcttcgggcctgtttcagatgttgacatggagtac
acgatggacatgttcttccgccagatgtgggttgatgagcgtttgaagttcgagggcccc
tatgagatcctgcggctaaacaaccgcatggtggacaagatctggactcctgatactttt
ttcagaaactccaaaaagtccatttcccataacatgaccacaccgaacaagctcttccgc
atcatgcagaatgggactgtcctctacacaatgagactgacaatcagcgcggagtgtccg
atgagtctgatcaacttccccatggacggccacgcctgtcctctaagatttgggagctat
gcctacacgaggagtgagataattttcacctggaagaaggggccagtagcatctgtcgat
tgtcccaaagagtccatgagtcttctgcagtacgaccttgtgggacagactttgtccagt
gagatattcaaatcaaatacaggtcactactctgtgcaggtgatccatttccacctccag
aggaagctcggttactacctcatacagacctacatccccctcataatggttgttgtgttg
tcacaagtctctttttggattaacaaggagtccgtcccagcacgtacagtggctggcatc
accacagtgctgaccatgaccaccttgagcattagcgcccgtcagtcacttcccaaagtg
gcctacgccaccgccatggattggttcattgctgtgtgctttgccttcgtggcatcggct
ctggtggagtttgcggcagtaaactactttgccacgctgcaggccaatcgtctgaagaga
cgaaaagccagacaagacaagctggaggtgttggcgaccggcagcgacgatgacgacaca
gtttctcagtcggacagcagccctcgggaaggcctgaagaggagaaaccactcagtgtgc
cgcagtgagccgggagaagctccgccagtgcccatctttctccagcagggctcagctttt
cctcagatcccgcagttggccggcaccagccccatcgacaagcacgcccgtatcctcttc
cccctgacattcgccctcttcaacctcgtctactggttcatctacctgggccaagacaac
atggagagtgccagagacatggatcttaaaaactga
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