Hippoglossus hippoglossus (Atlantic halibut): 117769848
Help
Entry
117769848 CDS
T07778
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117769848 (rnf20)
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117769848 (rnf20)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
117769848 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
zf-C3HC4
CC_Bre1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
BRE1
Bacillus_HBL
zf-RING_2
DUF7049
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
117769848
NCBI-ProteinID:
XP_034454901
LinkDB
All DBs
Position
10:complement(16442999..16454065)
Genome browser
AA seq
1027 aa
AA seq
DB search
MSGQKRPGDPGGPSSSGAPAEKRRERDGEDGGPGVSAAAGGSTAVETVIKLGGVSNSEEQ
DIKALQAKNRKLGEALDQRQVIEDELRERIERLETRQATDDASLLILNRYWNQFDENVQL
ITRRYDQASIEPEKSPGAEGRSLKPDTPEPDGDSNQERVKDRGHQGETSNSFLATLASST
SEEMEAELQVRVESSQKQANRVVEIYECLKRTVDQLKAEVDPGAEGSLWKAASTLNSLLS
SENERLQQLSEDLKQKHSHMTSESRSLGRAANKADQRVSELQVLIEELQWDMEKIRRREN
RLNAHLSEILERVNSKGYKVCGEASSVCGTITINKRKFEEMNSELEENRELADNRLTELQ
KLQQDLQTVHQENNNMKTELMSRAEGMVKETSEYRCLQSQFSVLYNESLILKGQLDETRA
RLNTTRTARLRQLEHMENDEVALQRKVRTEVFQLEDTLAQVRKEYEMLRIEFEQTLAANE
QAGPINREMRHLISTLQTHNQQMKGEVVKYKIRLRETQAELNQVRASKGSAILQSQSSSE
IDVKDETTSPSTPAISGEPAVKTEPDNGSSTPSSTGASVKTEPGVEPEATVKEEEKDEKK
EREEKKEKDTVKKEEKDREREKEKEKERDRPTRSSGSSSSVIKEEKEKSGSSGQPEESAG
ERLSVVGGSKRKEMEQLKIVRAELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKK
SKSEGEELRQRLRELEERERREGKKMADEEALRKIRSVEEQIDILNKKLSIAKQEEDALL
SEMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLL
TLKTQVDAQLQVVRKLEEKERLLQGTISTAERELALRTQALDMNKRKAQESALLSEEVRT
QLEQVQQRLGLVREEVVENSISREKESFNARRAQEDISKLRRKIEKAKKPAEKISNGDDI
LNEEINDYKARLTCPCCNSRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGAND
FHRIYIG
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccagaaacgtcccggtgacccgggcggcccctcgtcctccggtgcgcccgca
gagaagcggagggagcgggacggagaggacggaggtcccggtgtcagcgccgcggccggg
gggagcaccgcggtggagacggtcatcaaactgggaggggtgtcaaactctgaagaacaa
gacatcaaagctctccaggctaagaaccgaaagttgggagaagccctcgatcaaagacag
gtgattgaggacgagttgcgagagaggatcgagaggctggagacccggcaggccaccgat
gatgccagtctgctgatcctcaatagatactggaaccagtttgatgaaaacgtccaactg
atcaccaggcgttatgaccaagccagcatcgaacctgagaaatccccgggggctgagggc
cggagcctgaagccagatactccagaacctgatggcgactccaaccaggagagagttaag
gacagaggccaccagggagagacatccaactccttcctggccacgctggcgagcagcacc
agcgaggagatggaagccgagcttcaggtgagagtggagtccagccagaaacaggccaat
cgtgtggtggagatctatgagtgtctgaagcgcactgtggaccaactgaaggcagaggtg
gaccctggagctgagggcagtttgtggaaggcagcatccacactgaactccctcctgtcc
agtgaaaatgagcggctacaacagctgtctgaggacctcaagcaaaagcacagtcacatg
acgagcgagtcccgctctctgggtcgtgcagctaacaaagcagaccaacgtgttagcgag
ctgcaggttctgatcgaggagctgcagtgggacatggagaagatccgccgccgggaaaac
cgcctgaatgcacacctgagtgaaatactggagagggtgaacagcaaaggctacaaggta
tgtggagaggccagtagcgtatgtgggaccattactattaacaagagaaagtttgaggaa
atgaacagcgagttggaagagaaccgtgagctggcagacaaccgcctcactgagctgcag
aagctccagcaagacttgcaaactgttcaccaggagaacaacaacatgaagacggagctg
atgagtcgagcagagggcatggtgaaagagacttcagagtatcgttgtctgcagtcacag
ttttctgttctctacaacgagtctctaatcctcaagggtcaattagacgagacacgcgct
cgtctcaacactaccaggacggcacgcttgcgacagctggagcacatggagaatgatgaa
gtggctctgcagaggaaggttcgtacagaggtgtttcagctggaggacactctggctcag
gtcaggaaggagtacgagatgttgcgaatagaatttgaacagactcttgctgccaatgag
caagcaggtcctattaacagggaaatgcggcacttgatcagcacactgcaaacccacaat
cagcagatgaagggagaggtggtgaaatacaagataagactgagagagacacaagctgaa
ctcaaccaggtccgtgcctcaaagggcagcgccatcctccaatcacagtcaagctcagag
atcgatgttaaggatgagacgacctctccttcgaccccagctatctctggagaacctgca
gtcaagactgagcctgacaacggctcctcgacacccagcagcaccggtgcctcagtgaaa
acagagcctggcgtggaaccagaggcaacagtaaaagaggaggagaaagacgagaagaaa
gagagggaggaaaagaaagaaaaggacactgtaaagaaagaagagaaagacagagaacgg
gagaaagagaaggaaaaggagagagataggccgacccgcagcagtgggagcagcagcagt
gtgataaaggaagagaaggagaagtccgggagcagtggccaaccagaagagtcagctggg
gagcgtctgtctgtggtcggagggtcaaagaggaaggagatggagcagctgaagattgtc
agagcagaactcaagaaagcccaggagtcccagagggagatgaagctgctgctggacatg
taccgctcagcacccaaagagcagagggacaaagtccagctcatggctgcagagaaaaag
tccaagtccgagggagaggagctgcggcagaggctaagggagctggaggagcgggagagg
agggagggcaagaagatggcagatgaagaggctctgaggaagatccgttctgtggaggag
cagatcgacatcctcaataagaagctctctatagccaaacaggaggaggacgcactgctg
agtgagatggacgtgacaggccaggccttcgaggacatgcaggaacagaacatccggctg
atgcagcagctcagagaaaaagacgatgccaacttcaagctgatgagcgagcggatcaag
tccaaccagatccacaagctgttgaaagaggagaaggaggagctggcggatcagcttctc
accttaaaaactcaggtcgatgctcagctgcaggtggtgaggaagcttgaggagaaggaa
cgcctcctgcagggcaccatcagcactgctgagagagagttggcacttagaacacaagcc
ttggacatgaacaaacgcaaggctcaggaatctgcattgctgtcggaggaggtgcgaact
cagctggagcaggttcagcagaggctcggtttggtcagagaggaggtggttgagaacagt
atctccagggagaaagagtcctttaatgctcgacgagcacaggaggacatctccaaactt
aggagaaagattgaaaaggccaagaaaccagctgagaaaataagcaatggcgacgacatc
ttaaatgaagaaattaatgattacaaggcacgtctaacatgtccgtgctgcaactcccgg
gtgaaggacgctgtactgactaagtgcttccacgtcttctgcttcgagtgcgtcaaaaca
cgctacgacacacgccagaggaagtgccccaaatgcaacgccgccttcggagccaacgac
ttccatcgcatttacatcggctaa
DBGET
integrated database retrieval system
