Hippoglossus hippoglossus (Atlantic halibut): 117769876
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Entry
117769876 CDS
T07778
Symbol
sec24b
Name
(RefSeq) protein transport protein Sec24B isoform X1
KO
K14007
protein transport protein SEC24
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117769876 (sec24b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117769876 (sec24b)
Membrane trafficking [BR:
hhip04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117769876 (sec24b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
DUF3246
HpaB
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
117769876
NCBI-ProteinID:
XP_034454972
LinkDB
All DBs
Position
10:complement(24888102..24906359)
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AA seq
1213 aa
AA seq
DB search
MSAPGSASGSVSGYNHSSTPNGGAAPPRQNGPAHSYPPPGYYGAPPPQQSYPTIPANPVP
GKAPITNSANFYQNNHQQQHHQQQQQHLPQHHVAPSSYSAPPSSAPPSQPYATLPSPAPP
PSNTQYNHRPLQQQQQQQPPYTTPGSYYGQQAYHAPPAQPLQQQQQQQQQQPSLVPATAT
GTGAPLYPIVSYPSGPGSSQYGTLSSLQGTPTPPGVLPTQMGAPLHQYNALQPASTAPVQ
PGYGVCPPSQGPTVNGQGSTAPTTVHQQYDQSHQALQSYNSYGGTGGADTDQAPSRATSV
HSSPGHHQGMQYGYVANSGASSASATTSGPAAAAAAPPSSSSSEDEDEDDDDEEDEEAGG
DTSSSTTGSASPVPNSYDSLEGGSYPDSIPPSNDMSSQAQPYGSYGYSSMQPAYPQGPPS
HPDSSPTHDQYDQSGYEHYSRPFPNLSQLSAALGGLSGVPELEVEALTPINLMHERNLLP
PRPLEAPEPNLNGDLKKVNCSPQTFRCTLTSIPQTQALLNKARLPLGLLLHPFRDLQQLP
VITSNTIVRCRSCRTYINPFVTFLDQRRWKCNLCYRVNDVPDEFMYNPVTRSYGEPHKRP
EVQNATVEFIASSDYMLRPPQPSVYLFVLDVCHNAVEAGYLKYFCESLLENLDKLPGDTR
TRVGFLTFDSTIHFYNLQEGLSQPQMLVVSDIDDVFIPSHDSLMVNLKESRELVQDLLTS
LPAMFSQTKETHSALGPALQAAFKLMSPTGGRITIFQTQLPTLGAGMLQSREDPNQRSST
KGVQHLGPATDFYKKLALDCSGQQIGVDLFLLSSQYADLASLACISKYSAGSIFYYPSFH
YIHNPAQLEKFQKDLERYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLANVN
PDSAFAVQMSIDDSLADSSLACFQAALLYTSNKGKRRIRVHTLCLPVVNQLSDVYAGADV
QAITCLLANMAIDRSISSSLSDARDALVNAVVDMVTSYKSNVSNLQQSGIVVPSSMRLFP
LYILALLKQKALRTGTSTRLDERVFAMCEFKTQPLQQMMQMVHPDLYRLDNISDQGALHL
NDTLVPQPHLLHLAAERLNRDGAFLMDCGNVFYLWIGKCCNEMFIRDVLGCSNYASIPPN
MSHIPELETTLSERVRAFLDWLQDNRAFISTIHVVKDDAAGKASILQHLVEDRSESASSY
VEFLEHVQLQMSK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgccgggctccgcgagcggctccgtcagcggctacaaccacagctcgacgccg
aacggaggagccgcgccgccccgtcagaacggtccagctcactcgtacccacctccaggc
tactatggagccccacctccacaacagagctaccccaccatccctgccaaccccgtcccc
ggcaaagcgcccattacgaacagtgctaacttctaccagaacaaccatcagcagcagcac
catcagcagcagcagcagcatctcccccagcatcatgtagcaccctcctcatacagtgct
cctccaagctctgctcccccttctcagccatatgccacactcccctctcctgcaccccca
ccatcaaacacccagtacaaccatcggcctttgcagcagcagcagcagcagcagccgccc
tacaccactccaggatcctactatggacagcaggcgtaccacgctcccccggcacagccc
cttcaacaacaacaacaacagcagcagcaacaacccagtttggttccggcgacagctacc
ggcaccggagcgcccctctaccccattgtgtcgtacccatcggggccggggagtagtcag
tacggcacgctgagctccttgcagggcacccccacgccccccggagtgctgcccacccaa
atgggtgcaccgcttcatcagtacaacgcgttacagccagcctccacagcaccggtgcag
cccgggtacggcgtgtgtcctcccagtcaggggccaacggtcaacggacaaggaagcaca
gccccgaccacagtccaccaacaatatgaccaaagccaccaggccctgcagagttataac
tcctacggtggcaccgggggtgcagacacagaccaggctccctcaagagccacttcggtc
cattcctcgccgggccaccaccaaggcatgcagtatggatatgttgctaatagtggagct
agctctgcctctgccaccacctcaggcccagcagcagcagcagcagcacccccctcgtca
tccagctctgaggatgaggatgaggatgatgatgatgaggaggatgaggaagcaggtggg
gatacgtcctcctccaccactggcagtgcctctccggtgcccaacagctatgattcgctt
gaagggggcagctatccagattctataccaccttctaatgatatgagcagccaggctcag
ccctatggtagctatggttactccagcatgcagccagcctatccgcaggggccgccctcc
caccctgactcttctcccactcacgaccagtacgaccagtcaggctacgagcactactcc
cggccttttcccaacctgtcccagctgtctgcggccctcgggggcctgagcggggtgccg
gagctggaggtggaggctctgacgccgattaacctgatgcacgagaggaacctgctgccc
ccgaggcccctggaggcccctgaacccaacctcaatggtgacctcaagaaggtcaactgc
agtccgcagacattcaggtgtacgctgacgagcatcccccagacgcaggctttactcaac
aaggcccggctccctctgggcctcctcctccatcccttcagagacttacagcagttaccg
gtgatcacatcgaacacgatagtgcgctgtcgctcctgtcgtacctacatcaatcccttt
gtcaccttcctggaccagcgcaggtggaagtgtaacctctgttaccgggtcaatgatgtt
ccagatgagtttatgtacaacccggtcaccaggtcgtatggcgagccccacaaaaggccg
gaggttcaaaacgccaccgtggagttcatcgcctcctcagactacatgctgagacctcct
cagccgtcggtctacctgttcgtcctcgacgtgtgtcacaacgctgtggaagccggctac
ctgaagtacttctgtgaatcacttctggagaacctggataagttgcccggggacacgcgc
accagagtgggcttcctaaccttcgacagcaccatccacttctacaacctgcaggaggga
ctgtcacagccacagatgctggtggtgtcagacatagacgatgtgtttataccgtctcac
gacagtctgatggtgaacctgaaggagagcagagagctggtgcaggacctgctcacctcg
ctgccggccatgttcagtcagaccaaggagacccacagtgccctcggcccggcgttgcag
gcggccttcaagctcatgtctcccacgggcggccgcatcacgattttccagacacagctg
cccacgctgggtgctggaatgctgcaatcgagagaagaccccaaccagcgctcgagtact
aagggagttcagcacctcggccctgccacagacttttataagaagctggctctggactgc
tcagggcaacagatcggggtggatctcttcttgctcagctcccagtacgctgacctggcc
tcgctggcttgtatctccaaatactcagcaggcagcatcttttactacccctcctttcat
tacatccacaaccctgcacagctggagaagttccagaaggatctcgagcgctacctcacc
aggaagatcggctttgaggcggttatgagaatacgatgcactaaaggtttatccatccat
acgttccatggtaacttctttgtgcgctccaccgacctgctgtccctcgccaatgtgaac
ccagactctgccttcgctgtccagatgtcgatcgatgactctctggcagactcgtctctg
gcctgcttccaggctgcgctgctctacacctccaataaaggaaagaggcgtattcgagtt
cacaccctgtgtctgccggtggtcaaccagctgagtgacgtgtacgctggggctgacgtc
caagctatcacttgtctgctcgccaacatggccatcgaccggtcgatatcgtccagcctg
tcagatgctcgggacgctctggtgaacgccgtggtggacatggtgacctcctacaagagc
aacgtgtccaacctgcagcagtccggcatcgtggtcccctcctccatgcgcctgttccct
ctctacatcctcgctctgctcaaacagaaagcgctgcggacgggcaccagcacgcgactg
gacgagcgggtctttgccatgtgtgagttcaagacgcagccgctgcagcagatgatgcag
atggttcatcccgacctgtacaggctggacaacatatcagaccagggggcgctccatctg
aacgacacgctggttcctcaacctcatctgctccacctggcagcggagaggctgaaccga
gatggagctttcctcatggactgtggcaacgtgttttatctgtggatcggcaaatgctgc
aacgagatgttcatccgagatgttctgggctgttccaactacgcctcaataccccccaac
atgagtcacattcctgagctggagacgactctgtctgagagggtgcgagcgttcctcgac
tggctgcaggacaaccgagcgttcatctcaaccatacacgtcgtcaaagacgacgctgcg
gggaaagcttccatcctccagcacctggtggaggatcggtcggagtcggcttcatcttac
gttgagtttctggagcacgttcagcttcaaatgtccaagtag
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