Hippoglossus hippoglossus (Atlantic halibut): 117769877
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Entry
117769877 CDS
T07778
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03013
Nucleocytoplasmic transport
hhip03015
mRNA surveillance pathway
hhip03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117769877
09122 Translation
03013 Nucleocytoplasmic transport
117769877
03015 mRNA surveillance pathway
117769877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117769877
03041 Spliceosome [BR:
hhip03041
]
117769877
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
117769877
Spliceosome [BR:
hhip03041
]
Common components
Common spliceosomal components
Cap binding complex
117769877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
Ald_deCOase
MG280
Vfa1
AAA_13
AAA_11
2CompARG
Motif
Other DBs
NCBI-GeneID:
117769877
NCBI-ProteinID:
XP_034454975
LinkDB
All DBs
Position
10:24911851..24919873
Genome browser
AA seq
802 aa
AA seq
DB search
MSRRRHSDENDGGQAHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEAD
LPNYKNKILRILCAVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKETLKNNL
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRSDWFVYVVLSCLPWV
GKELYEKKDVEMDRLLSQVEGYLKRRVKTHVPMLQVWTAEKPHPQEEYLDCLWAQMQKLK
KDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPGHMPDAQYPMPQVVFRMFDYTDAPEG
PVMPGSHSVERFVIEENLHCIIKTHWKERKTCAAQLLSYPGKNKIPLNYHIVEVIFGELF
QLPAPPHLDVMYTTLLIELCKLQPGSLPQVLAQATEMMYMRLDTMNTSCIDRLINWFSHH
LSNFQFRWSWDDWSDCLAVDLDKPKPKFVKEVLEKSMRLSYHQRMVDIVPPTFSALIPAE
PIFIYKYLDESSSSLPGYPVSITVGNAIKNRASNEEILSILKEVPNPNQEDDDDEGETFN
PLKIDVFLQTLLHLAAKSFSHSFSALAKFHEILKALTDSDEGKLHMLKVVYEAWVNHPQM
IAVLVDKMIRTQIVDCAAVANWLFSQDMAHEFTRLFTWEILHSTIRKMNKHVQKIQKELE
EAKDKLEKQQHKRLGLVLQQKDSGDEEDMEKNSEDEDGQLEEQIERLQEKVESAQSEQKN
LFLVIFQRFIMLLTEHLVRCETGSVDISTPWYKSCIERLQQIFLMHHVTIHQYMGTLENL
LFTAELDPHILAVYQQFCALQL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggagacgacacagcgacgagaacgacggaggtcaggctcataaaaggaggaga
acatctgagcccatcgagatcgaggatcgtctggagtcactgatatgtcgtgtgggggag
aagagtacgtcgtccctggagagcaacctggaggggctcgctggcgtcttagaggccgac
ctcccaaactacaaaaacaaaatcctgcgcattttatgtgctgtcgcccgcctcctaccc
gagaagctgactgtctacacaactttagtcggcctcctcaacgccaggaactacaacttc
gggggcgagtttgtcgaggccatgatcagacaactcaaagaaaccttgaaaaacaacttg
tacaatgaagccgtttacttggttcgttttctgtctgacttggtcaactgccatgtgatc
gccgctccttcgatggtggccatgtttgaaaattttgtcagtgttactcaagaggaggat
gtaccacaggttcggtcggactggtttgtgtacgtggttctctcctgtctgccctgggtc
ggtaaggagctctacgagaagaaggacgttgagatggaccgactcctcagtcaggtcgag
ggctacctcaagaggagagtaaagacccatgtcccgatgctgcaggtgtggacagcggag
aagcctcatcctcaagaggagtacctggactgcctctgggctcagatgcagaagctaaaa
aaagaccgatggcaggagcgccacatccttcgcccgtatatcgccttcgacagcgtcctg
tgtgaggcgctgcaacacaacctgccgcccttcaccccaccgggccacatgcccgacgct
cagtacccgatgccccaggtcgtcttccgcatgttcgactacaccgacgcccccgagggt
cccgtgatgcccggcagtcactctgtggagagatttgtcatcgaagaaaacctgcactgc
atcatcaagactcactggaaagagaggaaaacatgtgctgctcagttactcagttatcca
gggaaaaataagattccgctcaactatcacattgtggaggtgatcttcggggagcttttc
cagctgcccgctccgcctcaccttgacgtcatgtacaccacactgcttattgaactctgc
aaactgcagccgggatctctgccacaagtcttggcccaagccacagagatgatgtacatg
aggctggacaccatgaacacctcctgcatagacagactaataaactggttttctcatcat
ttgagcaacttccagtttcgttggagctgggacgactggtccgactgcctggctgtggat
ctagataaacccaagcccaagtttgtcaaagaagttctggagaagtctatgagactttcg
tatcatcagcgaatggtggacatcgtccctccgaccttctcagcgctcatccccgctgaa
cccatcttcatatacaagtacctggacgagagctcttcgtcgttgcctggttacccagta
tccatcactgtggggaacgccatcaagaaccgtgcgtccaatgaagagatcctgtccatc
ctcaaagaagtgcccaaccccaaccaggaagacgacgatgatgaaggcgagactttcaac
cctctgaagattgacgtgttcctgcagactcttctccacctggcggccaaatccttcagc
cactccttcagcgccctcgccaagtttcatgaaatcctgaaggcgctgaccgacagcgac
gaggggaagctgcacatgctgaaagtggtttatgaagcgtgggtgaaccacccacagatg
atcgccgtgttggtggacaaaatgatccggacacagattgttgactgtgctgctgtcgcc
aactggctcttctcccaggacatggctcacgagttcaccagacttttcacctgggagatt
ttgcattccaccattcgaaagatgaacaaacacgtccagaagatccagaaggagctggag
gaggccaaggacaagctggagaaacagcagcataagaggttggggcttgtactccagcag
aaggacagcggtgacgaggaggacatggagaagaacagcgaggacgaggatggtcagctg
gaggagcagatcgagaggctacaggagaaggtggagtcggctcagagcgaacagaagaac
ctcttcctcgtcatcttccagcgcttcatcatgttgttgaccgagcacttggttcgctgt
gagactgggagtgtcgacatcagcacgccctggtacaagagctgcatcgagcgcctgcag
cagatcttcctcatgcaccatgtgaccatccaccagtacatggggaccctggagaacctg
ctgttcaccgcggagctcgacccccacatcctggccgtctaccagcagttctgtgctctg
cagctctaa
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