Hippoglossus hippoglossus (Atlantic halibut): 117770038
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Entry
117770038 CDS
T07778
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117770038
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117770038
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
U-box type E3
117770038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
U-box
zf-CCHC_2
zf-CCHC
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
117770038
NCBI-ProteinID:
XP_034454996
LinkDB
All DBs
Position
1:22596268..22610761
Genome browser
AA seq
1762 aa
AA seq
DB search
MSCVHYKFSSKLDYNTVTFDGLHITLNELKKQIMGRERLKATDCDLQITNAQTREEYTDD
EAHIPKHSSVIVRRTPLGGVKPAGRTFIVDRSDTAVVGPSRPTDSSPSMSLAQLAKTANL
VDANASEEDKIKAMMSQSNHEYDPIHYSKKAVGPPPAHYTCYRCGKAGHYIRQCPMLLVQ
DKSVEGPKPVRISKGIPQSFMVKAEPGTKGAMLTSTGEYAIPAIDAEAYAQGKKERPPFV
PHEQSSSEDDADPIPDELLCPICNDLMTDAVVIPCCGNSYCDDCIRTALLDSEEHVCFTC
KQSDVSPDNLIANKFLRQAVNNFKNETGYTKLVRKQVQQAALPPPRLQLSRPLHSRQQDP
LLANVTHPPPASVPTAAPQTQVQPPAPSPPVPGPVSAAATATATATAAAPIPPHAAAVEG
QDVSPAPAPVADQHSPMHSTGQGEPPPPGEMDPEPTVRRSPESTPEIGPHGYHFSVGLPP
PPRPPHPSGHQSRPHHSHRGGGRHWERSFRGRGDLPPAHLQTAPPPGPAPPVYPSPSMYP
PPPQPYPPPYTSGLLPPPPIGYPPQPIYAPGPPGLNPPWIPPGVQPPLPHLGPPLSQPPL
SKEEFYRQRHRQDKTTSKLDEFTKDFHKELMKYRNPPKRRRPSYSRSRSFSRSPFSRSPY
TRSRSRSRSRTYSYSPSRSRSRSRSHGRSFPRSPYSRHNGRSYGRSRSRSRSRSRSYGYR
RSGSPRSPPPFRAGPWEGAEGPGPFRSRSRSPGGFRNRSPGGRKPPPRELPPYELKGPSP
GGHDRWERERYRQWEKEYTDWYNKYYKDYDNQHPSLNHRGRGSRDRERDRMSPLPRDYSP
QGRGRRGREERGAPPHHPPSSSSSGTKSSTKVLKTKKVKKKKPGEESEPSHHSADRGDAT
PVRDEPMDEIPSINKTPPSSSKPASGSGVAKAPTSKSPAAPAKPSNKTVSKTQSDKTRKE
KAQKVKPKVKTEAVKPEAVKAKNDKVKKKTPEAVVIKKKDSSSSSSSVAKPVKTIKANPE
DNFNSTTPKKEKSKSSTVRPPLLKTPPLSSQTLPLPHPSLHDGPRLSHDIRGRRDLPPGS
GLLPISHPHGLPLIHRPPSPVDGRRRMGEEGRSLLGPPPGKLRRIDGLGGCSDVLSHSHM
SHQPPLHRLQLSSDRPGLLPLPGSREMIRGDADRGTIRPLMDLPMPLAQRRIKLNRDLGR
KGSTETSASDRAPLGPEKMSSTSDRSASSSVSEGDRSNSTTEGAGRKELSASAERRTSRE
RPGSAGERLPCSDREQDRVSGPDRDRDRVSGSDRDRGVGSERERERDRVSGSSSQKVAAT
AERDSDRERSARTERRTSSSGSGGGRSVCLDKLTIGEKSTTTRTPTDHQEKPSVSSKERS
EGSERAAKSDRSVSKDRTERSVPSGEKPAAAQKEAGKDGEGSVVKSKPRISRKVLTSHSS
STSSRSSQETKRSSEKDQKSVSSKPAELPPSSPVNSRGRSPSVSPAASLAREEPLIQPPP
RSKWEREDDEEGQENGATEPKEPSPVPQRSRGREGQTEAPKPVKSEGRESVREERRGAVR
EEKKMRAPREEGKGGRVAQANSDKPTKSKMVREEARGLRDEGRSTARDEGRGATGKEERS
AEGRGGGGREESRGPEPRRQRLCSDLGRETDEAAFVPDYSEGEGSEPERGRSSPSLSVSQ
ASRSASPSNPSDSGTTTTADKKKKKHKKHKKHKKHKKHGSQEKAEPKEHKHKHKKKKHKK
NKDKDGEEEEEKTEKAEEPVPC
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgtgttcactataagttttcttccaaactggactacaacacagtcactttcgat
gggctgcatatcaccctcaacgagctaaaaaagcagattatgggccgggagcgcctcaag
gccacggactgcgacctgcagatcacaaatgcgcagactcgtgaagaatataccgatgat
gaagcccacatcccgaaacactcctccgtgattgtgcgtcgcactccgcttggtggagta
aagcccgctggcaggacgttcattgtagatcgttctgacacagctgtggttggaccgtct
agacccacggattcttctccttctatgtcactcgcccaactcgccaagacggctaacctg
gtcgacgcaaatgcatcagaggaagacaagatcaaagccatgatgtcacagtcaaaccat
gaatatgaccctatacattattccaagaaagcagttggacctccacccgctcactatacc
tgctatcgttgtggaaaggctggtcattacattcgacagtgccccatgctgttggtccag
gataagagtgtggagggtcctaagccagtcaggataagtaaggggattcctcagagtttc
atggtgaaagcagagcctggcaccaaaggagccatgttaaccagcactggagaatatgca
atacctgcaatagatgcggaagcgtacgcacaaggaaagaaggagcgccccccctttgtt
ccacatgagcagtcatcgtctgaggacgatgcagacccaatccctgacgaactcctgtgt
ccaatctgcaacgacctgatgacagacgcagtagttataccctgctgcggaaacagttac
tgcgatgattgtatccggacggccttactggactcagaggagcacgtctgtttcacatgc
aaacaatcagatgtttcacctgataatctcatcgccaacaaatttctacgacaggctgtg
aataacttcaagaatgaaacaggatacaccaaactcgtacgcaagcaggtccaacaggca
gcactgcctccgcctcgcctccagttgtccaggcctctgcactcaagacagcaggaccca
ctgctggccaatgtcactcacccaccccctgcaagcgtaccaacggctgcacctcaaaca
caggttcagccccctgcaccctctcctcctgttcctggtcctgtttctgctgctgcgact
gctactgcgactgctactgctgctgctcctattcctcctcatgctgctgctgtcgaaggt
caagatgtttcaccagctcctgcacctgtcgctgaccaacattctcctatgcactctacc
ggccagggcgaaccacccccacctggtgaaatggatccagaacctactgtgagacgaagc
ccagaaagtaccccagaaattggaccacatggctaccatttttctgttggcctaccgcca
ccgccaaggccgccacatccatcaggtcaccagtcacggccccatcactctcaccgaggg
ggaggcagacactgggagaggtccttcagaggtagaggagaccttcccccggcccacctc
caaacagctccacctcctggaccagctcctccggtgtacccgtctccatccatgtacccg
cccccaccacagccctaccctcctccttacacatctggccttctacctcctcctccaatc
ggttacccgccccagccaatttatgcccctggaccaccggggctcaaccctccctggatc
ccacctggtgtccagccccctctaccccaccttggaccccccctctctcagccccccctc
tctaaggaagaattctacagacaaaggcaccgacaggacaaaactacatccaaactggat
gaatttactaaagacttccacaaagagcttatgaagtacagaaatccaccaaagagaaga
agaccatcttattctaggtcccggtcattcagtcgttcaccattcagccgctctccgtac
actcgctctagatcaagatctagatccaggacttactcttattccccaagtcgatcccgc
tcccgttcacgctcccatgggcggtcttttccacgctctccttattccaggcacaatgga
cgcagttacggacgttcacggtcaaggtcccgctcccgctcgcgttcttatgggtatcgc
cgctctggctctccgcggtctcctcctcccttccgggccggaccctgggagggagcagaa
ggaccaggacccttcaggtcccggtctcgctcccctggtggcttccggaaccgcagccct
ggtggacggaagccacctcctcgggagcttccaccgtatgaactaaagggaccaagtcct
ggaggccatgatcgctgggagagagaaaggtatcgacaatgggaaaaggagtacacagac
tggtacaacaaatactacaaagactacgacaaccaacatccctcactaaatcacagaggt
cgcggcagcagagacagggagagggacagaatgtctccgttacccagagattactcccct
caggggagaggaagaagaggtagagaagagagaggagctccccctcaccatccgccatcc
tcttcatcatcagggactaagtccagcacaaaagtccttaaaacaaagaaagtaaaaaag
aagaagcccggggaggaatctgagccatcacaccattcagcagacagaggtgatgctact
cctgtcagagatgaaccgatggatgaaatcccctcaatcaataaaacacctcccagctcc
tcaaaacctgcatctggctctggagtcgctaaagctcctacttctaaaagtcctgctgca
cctgctaagccctcaaacaagaccgtatccaagacccagtctgataagaccaggaaagag
aaggctcagaaagtaaaacctaaagtgaagacagaggctgtgaagccagaggctgtgaag
gcaaagaacgacaaagtaaagaaaaagaccccagaagcagtggtcatcaaaaagaaagac
tcctcgtcctcctcctcctctgtcgctaaaccggttaagaccattaaagcaaatccagaa
gataatttcaactcaactacccccaaaaaggaaaagagtaaaagctctacagtgaggcct
cccctgcttaagacccctccactctcctcccagaccctgcctctacctcatccttctctt
cacgatggccctcgactcagccatgacattcggggaagaagagatcttccaccaggtagt
ggtctcctcccaatatcccatccacatggactcccgctcatccatcgacctccctctccg
gtggacggacggaggaggatgggggaggagggccgctctttactgggacctcctcctgga
aagctgcggaggatagatggactagggggttgcagcgatgtcctctcccactcacacatg
tctcaccagcccccgctccacagactccaactctcttcagacagacccggtcttcttccc
ctgcctgggagccgtgagatgatccgaggagacgcagatcgaggaaccatcagacctcta
atggacctgccgatgccactcgcccagaggaggatcaagttgaacagagatctggggaga
aaaggcagcactgagacgtctgcctcagacagagcaccattaggtcctgagaagatgtcg
tccacatcagaccgatcagcttcttccagcgtttccgaaggtgacagatccaacagtaca
acagaaggggctggaagaaaggagctgtctgcatctgcagagaggagaacctctcgcgaa
agaccagggagtgctggagagagactgccgtgctcagaccgagagcaggacagagtctca
ggaccagacagagatcgagacagagtgtctggatcagacagagacagaggtgtgggttct
gaaagagagagagagagggacagggtttcgggatcgagctcacagaaagtagcagcgaca
gcggagagagacagcgacagagagaggtcagcgaggacagaacgaaggacctccagtagt
ggaagtggaggagggcggtcggtctgtctggataaactgactattggtgaaaaatccact
accaccaggacaccaacggaccatcaggagaaaccaagcgtgtcctccaaggagagaagt
gaaggttcagaaagagctgctaaatcggacaggagtgtgtccaaagacagaacagagagg
agtgtcccctcaggagagaaaccagctgctgctcagaaagaagcagggaaagatggcgaa
gggtctgttgtgaagagcaaacccaggatcagtcgaaaggttctgacgagccacagcagt
tccaccagctctcggtcgagtcaggagacaaagagaagctcagaaaaagaccagaagagc
gtatcctctaaacctgcagagctgccccccagtagccctgtgaactccagaggccgcagc
cccagtgtcagcccagcagccagcctggccagagaggagccactcattcagcctcctcct
cgctccaaatgggagcgagaggatgatgaagaagggcaggaaaatggagccactgagccc
aaggagccctcaccggtgcctcagaggagccgaggcagagaggggcagaccgaggctcct
aaaccagtcaagagcgaaggccgggagtctgtcagggaggaaaggaggggagcggtgagg
gaggagaagaaaatgagagcaccaagggaagagggtaagggtggtagggtggcacaggca
aattctgacaaaccaaccaaatcaaaaatggtgagggaggaggcgagagggttgagagat
gaagggagatctacagccagggatgaggggagaggagcgactgggaaggaggagagatca
gcagaagggagaggcggaggaggacgagaggagagtcgtggcccagagcccaggagacaa
cgtttgtgttctgacctgggccgtgagacggacgaggccgccttcgtccctgactacagc
gaaggtgaaggctcggagccggagagaggaaggagcagccccagcctgtccgtcagccaa
gcctccagaagcgccagcccgagcaaccccagcgactcggggaccaccaccactgcagac
aagaaaaagaagaaacacaagaaacacaagaaacacaaaaagcacaagaagcacggcagt
caggaaaaagcagagcccaaggagcacaagcacaaacacaagaagaagaaacacaaaaag
aacaaagacaaagatggggaggaagaggaggagaagacggagaaagcagaagagccggtt
ccatgctaa
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