KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117770172
Entry
117770172         CDS       T07778                                 
Symbol
polr2k
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC4
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03020  RNA polymerase
hhip03420  Nucleotide excision repair
hhip04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117770172 (polr2k)
  09124 Replication and repair
   03420 Nucleotide excision repair
    117770172 (polr2k)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    117770172 (polr2k)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hhip03021]
    117770172 (polr2k)
   03400 DNA repair and recombination proteins [BR:hhip03400]
    117770172 (polr2k)
Transcription machinery [BR:hhip03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     117770172 (polr2k)
  RNA polymerase III system
   RNA polymerase III
     117770172 (polr2k)
  RNA polymerase I system
   RNA polymerase I
     117770172 (polr2k)
DNA repair and recombination proteins [BR:hhip03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117770172 (polr2k)
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 A2L_zn_ribbon MCM_OB DmmA-like_C DUF5816 HypA DZR Cytochrome_C7 Zn_ribbon_13
Other DBs
NCBI-GeneID: 117770172
NCBI-ProteinID: XP_034455163
LinkDB
Position
11:complement(8711303..8712445)
AA seq 58 aa
METPKDVQPPKQQPMIYICGECHTENEIKARDPIRCRECGYRIMYKKRTKRLVVFDAR
NT seq 177 nt   +upstreamnt  +downstreamnt
atggaaacaccgaaagatgtgcaaccacccaagcagcagcccatgatctacatatgtgga
gagtgtcacacggaaaatgaaattaaggcccgtgatccaatccgatgcagagagtgcggt
tacaggatcatgtataagaagaggacaaagagattggttgttttcgatgccagatga

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