Hippoglossus hippoglossus (Atlantic halibut): 117770196
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Entry
117770196 CDS
T07778
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hhip01009
]
117770196 (ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhip03021
]
117770196 (ctdp1)
Enzymes [BR:
hhip01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
117770196 (ctdp1)
Protein phosphatases and associated proteins [BR:
hhip01009
]
HAD phosphatases
Fcp/Scp phosphatases
117770196 (ctdp1)
Transcription machinery [BR:
hhip03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
117770196 (ctdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
PTCB-BRCT
BRCT
P22_portal
Biotin_lipoyl
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
117770196
NCBI-ProteinID:
XP_034455221
LinkDB
All DBs
Position
11:complement(17061838..17128056)
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AA seq
1014 aa
AA seq
DB search
MEDPPAGSGGGGGGDSAVAEGPVVQVADICWSSAALPLRLLEWKVKPGTLINVDSVLALC
APIAPERATEAARLPEKKVKSDRAGVVRELCCQLGQVIPPGGVIVRIEVCSHPIVMKGLC
AECGQDLTQLQGTNGNQQTPISTATVSMVHSVPELMVSAEQAEQLGREDQQRLHRSKKLV
LMVDLDQTLIHTTEQHCQQLSNKGIYHFQLGRGEPMLHTRLRPHCIEFLAKIAKLYELHV
FTFGSRLYAHTIAGFLDPKKNFFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVSIIDDR
EDVWKFAPNLITVKKYIYFQGTGDINAPPGSRESQMARKGGPSSRPAESTESAGTIGTEE
HNNGIRKRSKDQNPSGKDEPTASQSSQGVPTNAPTHPTGGVEDVSGQSKESVTESVTESV
TESVPEALPEAGSKEAQETDRTNVKEDDSKGTQEAQEGANSSAPSHDSNNLDFDLSSDSD
NDSITDKPPSSDGDSEGKSCQTKKKPEPEGVTQEPSDGEGAKVESKGQGEIDNSSDVAEP
SGVLLPDPELGNGCSDRTEPETESQNSEQSGVTMGEELLDQSMEDEEEEEADIDQDDHLI
YLEEVLERVHAEYYGRYEAFLRKDAPETPDIRKIVPELKGKTLEGTMIVFSGLYPTNYPM
ERTREFYHAKALGAKIGKNLALNSEDPNRTTHLIAARAGTEKVRRAQGCNHLYVVNPDWL
WSCLERWERVEEQLYPLKEDYSKMPRSNSPAAFPDNQGPLQRPLFQPAPIHHRPPPPELE
VRIYDPVTGKLIRRGPQVSQPQPYLQAPGSMLLSDHQQSCLRGSSKDQQDDAAGPSHDDE
QPGPSRRKRQPSMSETMPLYTLCKEDLESMDKEVDDMLGEESDNESDGRGKEKPGNEEVE
DEDEEEEEEEQQQQQQQQQQQQQQQPGAGQIAGDGHDAQTLTLEDRLQTPFSEAGLLGGV
PRGQKRKHDEGKDVEESKQFADESSKDSNEEEEGSSSEADEMAAALEAELNDFM
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccctcctgcaggttctggcggcggcggcggcggcgacagtgcggtggcggag
ggccccgtggtgcaggtggcggacatctgctggtcgagcgcggctctcccgctgcggctg
ctggagtggaaggtcaaacccgggactctcatcaacgtggactccgtgctggctctgtgc
gcccccatagccccggagagggcgacggaggctgccaggctgccggagaagaaggtgaaa
tcggaccgcgccggagtagtgagggagctgtgctgtcaacttgggcaagtcatccccccc
gggggtgtcattgtcagaatagaagtatgcagccacccgatagtgatgaagggtttatgt
gccgaatgtggccaggacctgacacagctgcagggcacgaatgggaaccaacaaactccc
atctccacagcaacagtctccatggtgcacagtgtccccgagctgatggtcagtgcagag
caagcagagcagctgggcagagaagaccagcagaggctccaccggagcaaaaagctggtt
ctgatggtggatctggaccagaccctgatccacaccactgaacagcactgccagcaattg
tccaataagggcatctaccacttccagcttgggcgaggagagcccatgctccacacacga
ctacgcccgcactgcatcgagttcctggcgaaaattgccaaactctacgagttgcacgtc
ttcacattcgggagccgcctttatgcacacaccattgcaggctttctggaccctaaaaag
aattttttctctcatcggatcctttctagagacgaatgcatcgaccccttctccaagacg
gggaatcttaggaaccttttcccatgtggggattcgatggtgagcataatcgatgaccga
gaggacgtgtggaagttcgcaccaaacctcatcactgtgaagaaatacatctacttccaa
ggcacaggggatatcaatgctccccccggatcacgggaatctcagatggccaggaaagga
ggtccctcaagtcggccagcggagagcacagaatcagcagggacgattggaacagaagag
cataataatggcatcaggaaaaggtcaaaggaccagaatccgtctggaaaggatgagccc
acagcatctcagtcttctcagggagtaccaacaaatgcaccgactcaccccacagggggt
gtggaggatgtgtcaggacaaagtaaagagtcagtgactgagtcagtgactgagtcagtg
actgagtcagtgcctgaggcgctgcctgaggcagggtcgaaagaagctcaggaaacagat
agaacaaatgtaaaggaagatgacagcaaggggacgcaagaggcacaggaaggtgcaaac
tcatcagcacccagccacgactccaacaacttggactttgacctgtcaagtgacagtgac
aatgactctattacagacaaacctccctcatctgatggtgatagtgaagggaagtcttgc
caaacaaaaaagaaaccagaaccggaaggtgttacgcaagagcccagtgatggggaaggg
gccaaggtagagagtaaaggtcagggagaaatagacaacagttcagatgtagcagaacct
tcaggagttcttcttccagacccagagctcggaaatggctgctcagacaggacagagcca
gaaacagagtcccagaatagtgaacaatctggggtcaccatgggggaggaactgctagac
cagagtatggaagacgaggaggaagaagaagcagatattgaccaggatgatcacctgatc
tacctggaggaagtgctagaaagggttcatgctgagtactatggccgctacgaggcgttc
ctgaggaaggacgccccggaaaccccggacatccgcaagattgtcccagagctgaaagga
aaaacactggagggaacgatgatagtgttcagtggtctgtacccgaccaactaccccatg
gagaggactcgtgagttttaccatgccaaggcactgggggccaaaattggcaagaatctg
gctctcaactccgaagatcccaatcggacaacacatctcattgcagcaagagctggcaca
gagaaggttcgtcgggcacagggctgcaaccacctctatgttgtcaatcccgactggctg
tggagctgtctggagcgctgggagagggtggaggagcagctgtacccactaaaggaagac
tactccaagatgccaaggagcaacagtccagcagcctttcctgacaatcagggccccctg
cagaggcctcttttccagccagctcccatccaccacagacctccacctccagagctcgag
gttcggatctacgatcccgtcacggggaagctgatccgcaggggccctcaggtgtcacag
ccgcaaccctacctccaggctccagggtcaatgttgctctctgatcaccaacagtcttgt
ctcaggggatcttcaaaggatcagcaggatgacgcagcggggcccagccacgacgacgag
cagcctgggccgtctcgtagaaaacgacagccaagcatgtcagaaactatgcctctatac
acactttgcaaggaggatctagagagcatggacaaagaggtggacgacatgttaggtgag
gagagcgacaacgagagtgatggccgagggaaggagaagccaggtaatgaggaggtggag
gatgaggatgaagaagaagaggaagaggagcagcagcaacagcaacagcaacagcagcag
cagcagcagcagcagccaggagctggacagatagcaggagacggccatgatgcccagacg
ctgaccctggaagacaggcttcagacgccgttcagtgaggccggtctgctgggtggtgtg
ccaaggggccagaaacggaagcacgatgaaggcaaggacgtagaggagagtaagcagttt
gctgacgagtcctccaaagactccaacgaagaagaggaaggcagcagctctgaggcagat
gagatggccgccgcactggaggcggagctcaatgactttatgtga
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