Hippoglossus hippoglossus (Atlantic halibut): 117770243
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Entry
117770243 CDS
T07778
Name
(RefSeq) serine/arginine-rich splicing factor 6-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03040
Spliceosome
hhip05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117770243
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117770243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhip03041
]
117770243
Spliceosome [BR:
hhip03041
]
Common components
Common spliceosomal components
SR proteins
117770243
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
117770243
NCBI-ProteinID:
XP_034455313
LinkDB
All DBs
Position
11:complement(3839492..3844161)
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AA seq
422 aa
AA seq
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MSRVYIGRLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKEL
CGERVIVEHTKGPRRDGGYGGGGGGGGGGRNNEKPLQSPSQTTGQPRSHQTTSGYGRWGR
DRYGPPIRTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRKNEGVIEFRLYSDM
KRALEKLDGTEVNGRKIRLIEDRPGARRRRSYSRSRSHSRSRSRSRRSRKSRSRSESSSR
SRSRSRAASQSRSRSRSKKNKTKIKKEEEERSNGAQKNKDRSRSRSPKSRSPKSRSPKSR
SPKSKKGKKEGKKIKKEDSHSRSRSRSRSRSRSGVKDRSRKSGSKGREPPKSDDEGREPE
RRVSRSRSRSPVDLKSRARSKSRSKSKSRSPTPAKARTHSRSASRSESRSKSRSPSRSRS
RS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtccagggtgtacatcggccgactgagctaccgggcccgggagaaggacgtggagcgg
ttcttcaagggctacgggaagatcctggaggtcgacctgaagaacgggtatgggtttgtt
gaattcgatgacccccgcgacgcagacgatgctgtctatgacctgaacggcaaagagctg
tgtggagagcgggtcattgtggagcacaccaaggggccccgtcgtgatggaggctatggt
ggtggtggtggcggcggaggtggtggaaggaacaacgagaaaccgttacaatcaccctca
cagactacagggcaacccagaagtcatcaaactacaagtggatatgggcgctggggaaga
gacagatatggtccgcctataaggacagattatcggctcattgttgagaatctttccagc
cgctgcagctggcaggatttaaaggactacatgaggcaggcaggggaggtgacttacgcc
gacacccacaagggccggaaaaacgagggggtgatagagttcaggctctactctgacatg
aagagggccctggagaagctggacggcaccgaggtgaacggcagaaagatccggctcatt
gaggaccgacctggagcccggcgccgccgctcttattcccgcagtcgcagccactccagg
tctcgctccaggagccgcaggtctcgcaagagccgcagccgcagtgagagcagcagtcgc
agccgctctcgctccagggcggcgtcccagtcccgcagccgatctcgcagcaagaagaat
aagactaagatcaagaaggaggaagaggagcgcagcaacggcgctcagaagaacaaggat
cgcagcaggagccgctcgcccaaaagccgcagccctaagagccgctccccgaaaagccgc
agccccaagagcaaaaaggggaagaaagaagggaagaagataaagaaggaggattcccac
tccagatcccgctctcgctccaggtctcgttctagatcaggagtgaaagatcgctccagg
aaatctggctcaaagggccgcgagccgcccaagagtgacgacgagggacgcgagcccgag
aggagggtctctcgctcccgctcccgcagcccggtcgacctcaaatccagagccaggtcc
aaatccaggtctaaatccaagtcccgttcccccacacccgccaaagcccgcacgcactcc
cgctccgcctcacgatcagagtcccgctccaaatcccgctccccgtctcgttcccgttcc
cgctcctag
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