Hippoglossus hippoglossus (Atlantic halibut): 117770291
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Entry
117770291 CDS
T07778
Symbol
arid1ab
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117770291 (arid1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117770291 (arid1ab)
03021 Transcription machinery [BR:
hhip03021
]
117770291 (arid1ab)
03036 Chromosome and associated proteins [BR:
hhip03036
]
117770291 (arid1ab)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Helix-turn-helix
ARID
117770291 (arid1ab)
Transcription machinery [BR:
hhip03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117770291 (arid1ab)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117770291 (arid1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
117770291
NCBI-ProteinID:
XP_034455477
LinkDB
All DBs
Position
11:complement(17977000..18044730)
Genome browser
AA seq
2332 aa
AA seq
DB search
MAAQVASVATLNTSPPSELKKPDRDPQEESVPGEKQHENKEPGPDGGSPGQKELQDGTDA
GNVGGGGDSDMKNGNGNLPRVNNNNSSNQNDTGGPEGNNHPGMGHHHPGPFPPPPYGYNQ
HYSRAPFHQHGGQQSPGMAAASGPGMMDPYPPNSHEHGYPNHYNNYSPFQNRTSFQGQGY
GAMNSPRNNQPPAAGGQPGKQQPAGGTTAMAASYNNQRYNVGNQQPTSTPTLNQLLTSPS
STRSYPNYPQGDYNNQEGANKGPGELGSSQYGGVHPGWQPRTHHQPPMSPGNTGQPPSRN
QPPSPMDQVGKMRGQPYGGPNPYSQQQQGPPTGPGPQQGGSYPGQAYGPPGPQRYPMGMQ
SRTPGTMAGMQYGQQMSTYGQQGPAGYGQQSQGYYGQHGPPTHPGQQQPTYPVQPQGSSG
PTYPQQGHPSQSPGQHGQTGPPYQQSQGPHGPPPGQPPYSQPSQSQPGQPPYVPPQQQQS
QQPPQQQQGPGPQSQQGPQGQPGYPQPPGPGQPPPQQTPQQQQQQQQQGPPQQQQQQQQQ
QPQPQPGGQPPQAQQPSGHQQGQASPYSQTPPQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
REQQQQREQQQQREQREQQSSYQRFPPPPQELSQDSFSSQSSAPPSNQPMASSKSSQEDS
MQGRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPHLPG
IRGPSPSPVGSPASVTPSRTGPLSPAAVPGNQMPPRPPSVQSDSILHSSMNQSAMGQDRV
YMRNPQMPPYGSPGQPGSALSPRQSSGGQMHSGMGPYPQNNSMGNYGPQGGQYGPQGYPR
QPGYTAMPNANYPSGPGMGGSMNPMPGQASGTPYGNMPPGRIGPGQMGARPYGPVMASNM
AGMPPQVASGMCPPPGMNRKDGGPSMHHGPTNSIHNRPPGYPNMSQGMMGSGSPYGPGMN
SMHGMMNQGGPGPYPMGANVANNTPGMAPTPEFGMDKMIPAPKINNKVEGTPKPETKKKS
SSSTITNEKITRLYELGPEPERKMWVDRFLAFAEEKAMGMNNLPAVGRKPLDLFRLYVSV
KEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIF
NADTKKNQAKIQPPSPAGSGSLQGPQTPQSTSSSMAEGGDLKPPTPASTPHTQMPPMPGV
RSSVNLQDPFADGGDPAFSRRNALTPNSQGYQPAMGGPEMMGRMGPYESTKDPFGGMRKA
GEQFMSPGPNSGMAEQYNRGPPGPMGNMQMGQRQQYPYGYDRRQEPGMGPDGSMGPGAPQ
PNMMPSGADTGMYSPSRPPPQQRHESYPNQYPGQGAPPGGPYPNQQPGMYPQQQPNYKRP
VDGGYGPPAKRHEGEMYSVPYSGQQQPGPQPSGPQGQQDMYNQYNAYPGGERRPPGPQGQ
FPFPFGRDRGPSSAGPNSQSPMPPQMMASPMPSGPDGPQGPMWQGRTEIGYQNYPNRQGP
PVPGQGPGYHGMNRSEEMMPSDQRMNHEGQWPGHVNQRQPPFGPGGSGPPMTRPLPSTYQ
TSQNHIPQVSSPAPMPRPMESRTSPSKSPYMHPGIKVQKAGPPVPASHIGQAPVQQPMIR
RDVAFPPGSIEASQPHLKPRRRLTIKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLY
DDNSISTFNLCSLPGFLELVVEYFRRCLIEIFGILKEYEVGDPGQRTLIDPNAAEDSDDD
ILMPEGEDMDTDEEDEDDEEVKESKANPDTSSPIQVKQEEDSSQKDKSSEDEDEEKERKP
SIKEPSTSTSGSSVDPNLHSEKPKQASKFDKLPIKVVRKKNPFLLNHSSKLGQRQSFDSG
LIHWSIGGGDTTEHIQTHFESRMELLKQRKRLQTAAESRKKVQLLEMATENPEKSKSNEE
DKPRAQPTQSSEPQKSLAEKTTPPLPISAPVTATIDDVLSARPGSVTEEVVRGGAEEQKE
NGKYLFSINPDFQSRRNVKILEDEPHSKDETPLSTLSDWQDSLARRCICISNIVRSLSFV
PGNDLEMSKHPGLLLLLGRLVLLHHRHPERKQAPVTYEKEEEEDEGVSCERDEWWWDCLE
VLRENCLVTLANISGQLDLSIYPESICLPLLDGLLHWAVCPSAEALDPFPTLGPHGSLSP
QRLVLETLSKLSIQDNNVDLILATPPFSRMEKLYGSLVRLVGERKVAVCREMAVVLLANL
AQGDSMAARAIAVQKASVGNLLGFLEDSLAATQYQQSQSSLLQMQGGPQFEPTSVDMMRR
AARALHALAKVEENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
6999 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgtcgccactctcaacaccagcccgccatccgaactcaaa
aagccggatcgggacccacaggaggagtcggtaccgggagagaagcagcatgaaaataag
gagccgggacctgacggcggatctcccggtcagaaggaactgcaggacgggaccgatgct
ggaaatgttgggggaggaggggattctgacatgaagaacggcaacgggaatttgcccagg
gtaaataataataatagcagtaatcagaatgataccggcgggcccgaagggaataaccat
cccgggatgggacaccaccacccgggcccctttcctccacctccttacggttacaaccag
cactacagccgggccccttttcatcaacatggcggacaacaaagccctggcatggcagct
gcatcggggccgggcatgatggacccttacccccctaattcacacgaacacggatacccc
aaccattataacaactacagcccgttccagaacaggacttcttttcagggccaaggatac
ggggccatgaattccccgcgtaacaaccagcctccggcggctggggggcagccaggcaag
caacagccagcaggaggaaccacagctatggctgcctcgtacaataatcagaggtataac
gtgggaaaccaacaacctacgtctacgccaactttaaatcagcttttgacatccccgagc
tccaccaggagctacccgaactacccccaaggagactataacaatcaggaaggggccaac
aagggaccaggagaactgggcagcagtcagtatggtggtgtccatccgggttggcaacca
aggacccaccaccagcctcccatgagcccgggaaacactggacaacctcccagcaggaac
cagcctccaagcccaatggaccaggtagggaagatgcgtggccagccatatggaggaccc
aacccctattcccagcagcagcaagggcctcccacagggcctggaccccaacagggaggc
tcatacccaggccaggcctatggacctcctgggcctcagagatatccaatgggcatgcag
agccgaacacccggcactatggctggcatgcagtacggacagcagatgtcaacctatgga
cagcagggccccgcaggctatggccaacagagccagggatactatggtcagcacggcccc
ccaactcaccctggccagcaacagcctacttatcctgttcaaccacagggaagctcggga
cctacctaccctcagcagggccacccttcacagtctcctggccaacatgggcagacagga
cccccttaccaacaatcgcaaggtccccacggccctcccccaggacagcctccgtatagc
cagccctcacagtctcagccgggacagccaccttacgtccctccccagcagcagcagtcg
cagcagccgcctcaacagcagcaaggtcctggtccccaaagtcagcagggccctcagggc
cagcctggctacccacaacccccaggaccagggcagccaccaccgcagcaaaccccacaa
caacagcaacagcagcaacaacaagggcccccacaacaacaacaacaacaacaacaacaa
caaccacagccacagccaggaggtcagcctcctcaagcccagcaaccttcaggtcatcaa
cagggtcaagcatcaccttactctcagacaccgccacagcagcagcagcagcaacagcag
cagcagcagcagcaacaacaacaacagcagcagcaacaacaacaacaacagcaacagcag
cgagagcagcaacagcagcgagagcagcaacagcagcgagagcagcgagagcaacagtca
tcatatcagaggtttccacctcctccacaggaactctcccaggattcatttagctcccag
tccagtgctcctccttccaaccagcccatggcctccagcaagagcagtcaagaggacagc
atgcagggtcggccatccagtctgccggatctgtcggggtccatcgacgacctgcccact
ggtacagagggggccctgagcccaggggtcagcacttcaggggtgtccagcagtcagggc
gagcagagcaaccccgcccagtcgcctttctcgccacacacttcgccccacctgccaggc
atacgtgggccctctccctcgcctgtgggttcccctgccagcgtcaccccctctcgcact
ggtcctctgtctccagctgctgtgccaggtaatcagatgcctcctcggccgcccagcgtc
cagtcggacagcatcttgcactcttccatgaaccagtcagccatgggccaggacagggtg
tacatgcgtaaccctcagatgcccccatacgggtcccctggacaacctggctccgcctta
tctccacgtcagtcttcaggaggccagatgcatagtgggatgggaccctacccccagaac
aactccatgggaaactacgggcctcaggggggacagtacggcccacaaggttaccctaga
cagcccggctacacggcgatgcccaacgccaactaccccagtggccctggaatgggtggc
tccatgaaccccatgcctggtcaggcaagcgggactccttatggaaacatgccgcccggt
agaataggcccgggccagatgggtgctcggccctacggtcctgtaatggcctctaacatg
gcaggcatgcctcctcaggtggcttccgggatgtgtcccccgccaggcatgaacaggaag
gatggcggcccctccatgcaccatgggcccactaattccatacacaacaggcctcctggc
tacccaaacatgtcccagggcatgatgggatcaggctctccatatggccctggcatgaac
agcatgcacggtatgatgaaccagggagggccagggccttacccaatgggagcaaacgtg
gccaacaacacccctggaatggctcccactccggagtttggcatggataaaatgatccct
gctccgaagataaacaacaaagtggaagggactcccaagcctgaaaccaaaaagaagtca
agctcgtccaccatcaccaacgaaaagattactcgtctgtatgagctcggcccggagcca
gagaggaagatgtgggtggacagattcctggccttcgctgaggagaaggccatgggcatg
aacaacctgcccgctgtgggacgcaagcctctcgacctcttcagactctacgtgtccgtc
aaggagattgggggcctcactcaggtgaacaagaacaagaagtggagggagctggccacc
aacctgaacgtaggcacgtcgagcagcgcagccagctcgctcaagaaacagtacatccag
tgtttgtacgcctttgagtgcaagattgagcgaggcgaggacccgcccccagacatcttc
aacgcagacaccaaaaagaaccaggcaaagatccagcctcccagcccagctggttctgga
tccctgcaagggccccaaacgcctcagtccaccagtagttcgatggccgaggggggagac
ctgaagccccccactccggcttccactccacacacacaaatgcctccaatgcctggcgtc
aggagtagcgtgaatttgcaagacccttttgctgatggtggcgacccagcattttccaga
agaaacgctctgactcccaactctcagggttaccagcctgcgatgggcggcccagagatg
atggggcggatgggtccctacgagtccaccaaggacccctttggtggcatgaggaaagct
ggagagcagttcatgtcgccaggacccaacagtgggatggcagagcagtataacagaggc
ccaccaggccccatgggcaacatgcagatgggccagaggcaacagtacccatacggatat
gaccgaagacaggagccaggcatgggccctgatggcagcatgggaccaggagctcctcag
cccaacatgatgccttctggagccgacacagggatgtactcacccagccgccctccacca
cagcaacggcatgagtcctatcccaatcagtaccctggccaaggagctccccctggtggc
ccatacccaaatcaacagccaggaatgtatcctcagcagcaaccgaactacaagcgtcct
gtcgatggagggtatggacctcctgccaagcgacatgagggtgaaatgtacagtgtcccc
tacagtggtcagcagcagccaggtccacagccatcggggccccagggccaacaggacatg
tataaccagtataatgcgtatcctggaggtgaacgaagaccaccgggcccacagggccag
ttcccctttccctttggtcgggacagaggaccgtcatctgcaggccccaactcccagtct
ccaatgcctccccagatgatggcgagccccatgccttcaggtcccgatggcccccaagga
ccaatgtggcagggtcgcactgagatcggctaccagaactatcccaaccgacagggacct
cctgtacccggccagggccccggctaccatggcatgaaccgctcagaggagatgatgcca
tcagaccaacgcatgaaccacgagggccagtggccgggtcacgtcaaccagcggcagcca
ccatttggccctggtggttctggaccgcccatgaccagacccctgccatccacctaccag
acttcccagaaccacattcctcaggtgtcaagtccagcgcccatgccccggccaatggaa
agcaggacgtcacccagcaagtccccctacatgcatccgggcattaaggtgcagaaagcc
ggacctccagtacctgcctcccacattggccaggcccccgtgcagcaacccatgatcagg
cgagacgtggccttccctccaggctctattgaggcctcacaacctcaccttaaaccccgc
aggcggctcaccataaaagacataggcactcctgaggcttggagagtgatgatgtcacta
aagtcaggcttactagctgaaagcacatgggccttggacaccattaacattctgttgtat
gatgacaacagcatttctacatttaacttgtgctcgcttcctggattcctcgagttggtg
gttgagtactttagacgctgcctcatcgagatcttcggcatcttaaaggagtacgaagta
ggggaccccggccagcgcaccctcatagaccccaatgctgcggaggactctgatgatgac
atcctcatgccagagggtgaggacatggacacggatgaagaagacgaagacgatgaggag
gtaaaggaatcaaaggccaaccctgacacctcctcaccaatccaggtgaaacaggaggag
gacagctcccagaaagacaagtcttcagaggacgaggacgaggagaaggaaaggaagcct
tctatcaaggaacccagtacctctacctcagggtcctccgtggaccccaacctccactcg
gaaaagcccaagcaggctagcaagtttgataaactccccatcaaggtcgtgcggaagaag
aatcccttcctgctgaaccactcatccaagcttgggcagcggcagagctttgacagcggc
ttgatacactggagcattggtgggggggacactaccgaacacatccagacccacttcgag
agtaggatggaactcctcaagcaacggaaacgcttgcaaacggccgctgagagccgtaag
aaggtccagcttctagagatggcaacagaaaatcctgagaaatccaaatccaatgaggag
gataaacctcgggcgcagccaacccagtcgtctgaacctcagaagtctctagcagagaag
accactcctccacttccaatcagcgcaccagtcactgccaccattgatgacgtactatct
gcccgtccagggtcagtcacagaggaagtggttcgtggaggcgcagaggagcagaaggaa
aacggcaagtacttgttcagcatcaaccctgacttccagagccgccgcaacgtgaagatc
ctggaggacgagcctcacagtaaagatgagacgccactcagcactctgtcggactggcag
gactcgctagctcggcgctgcatctgcatctccaacatagtgcgcagtctctccttcgtc
ccaggtaatgatttggagatgtcgaaacacccaggcctcctgctgctgcttggccgcctg
gtgctgctccaccacaggcacccagaacgcaaacaagcaccggtcacctacgagaaggag
gaggaggaagatgagggcgtgagctgcgagagggacgagtggtggtgggactgcctcgag
gtcttaagggagaactgtttggtcactcttgcaaacatctcaggccagctagacctttct
atctacccagagagtatatgcctgccactgctggatggcctgctccattgggctgtctgc
ccctcagcggaggccctggaccctttccccacgctggggccccacggctcactttccccc
cagagactggttcttgagaccctcagcaagctcagcatccaggacaacaacgttgacctc
attctcgcaacaccgccgttcagtcgcatggagaaactctacggctcactggtgcgtcta
gtcggtgagcgcaaggtggccgtctgccgggaaatggcggtcgtcctgttggcgaatctc
gcccagggtgacagcatggcggctcgggctattgctgtgcagaaagccagcgtaggtaac
ctgctgggcttcttggaggacagcctagctgccacacagtaccagcagagccagagctcc
ttgctacaaatgcagggcgggccccagtttgagcccacgagcgttgacatgatgcggcgg
gcggcccgagccctgcacgctttggcgaaggtagaagaaaaccactctgagttcactttg
tacgagtcgcggctactggacatctcagtgtcccctcttatgaactctctggtgtcccaa
gtgatctgtgacgtactatttctgattggccagtcatga
DBGET
integrated database retrieval system
