Hippoglossus hippoglossus (Atlantic halibut): 117770348
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Entry
117770348 CDS
T07778
Symbol
rab42a
Name
(RefSeq) ras-related protein Rab-42a
KO
K07925
Ras-related protein Rab-39B
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117770348 (rab42a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117770348 (rab42a)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
hhip04031
]
117770348 (rab42a)
Membrane trafficking [BR:
hhip04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
117770348 (rab42a)
GTP-binding proteins [BR:
hhip04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
117770348 (rab42a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
SRPRB
DUF5004
Motif
Other DBs
NCBI-GeneID:
117770348
NCBI-ProteinID:
XP_034455600
LinkDB
All DBs
Position
11:complement(18979192..19001145)
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AA seq
218 aa
AA seq
DB search
MDILWQYQFRIILLGDSTVGKSSLLKRFTDGIYSDVADPTVGVDFYARSMDIEPGVKIKL
QLWDTAGQERFRSITTSYYRNSVGGLLVFDLTNRKTFDHVREWHKEVSEHILPHHMVYIL
IGHKSDLNKDRKVTRDEAENLAADLGIRYVETSAKCNINVDRAFELLTRDIYELMKMGEI
VTRDGWDGVKSGLTAKVLYPADDEEERARVSAEKGCHC
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggatattttgtggcaataccagttccgaatcatcctgctcggggactccaccgtgggg
aagtcgtcgctgctgaagcgcttcacggacggtatctacagcgatgtggcggaccccacg
gtcggggtagatttctacgcccgctcgatggacatcgagcccggggtgaagataaagctg
cagctctgggacacggctggtcaggagcggttcaggtccattacgacttcatattaccgc
aactctgtgggcgggctgctagttttcgatctcaccaatcgcaaaacctttgaccacgtg
agggagtggcacaaggaggtgagtgagcacatcctacctcaccacatggtctacatcctc
atcggccacaagagcgacctcaacaaggaccgcaaggtgacccgggacgaggcggagaat
ctggcggccgacctgggcatccgctacgtggagacctcggccaagtgcaacattaacgtg
gaccgggcctttgagctgctgaccagagacatctacgagctgatgaagatgggtgagatc
gtcacccgcgatggatgggatggtgtgaagagcggcctcactgctaaggtcctctacccg
gccgatgacgaagaggaacgggccagggtgtccgctgaaaagggctgccactgctga
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