Hippoglossus hippoglossus (Atlantic halibut): 117770350
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Entry
117770350 CDS
T07778
Symbol
snx27a
Name
(RefSeq) sorting nexin-27a
KO
K17936
sorting nexin-27
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117770350 (snx27a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hhip04990
]
117770350 (snx27a)
Membrane trafficking [BR:
hhip04131
]
Protein recycling
Others
Others
117770350 (snx27a)
Domain-containing proteins not elsewhere classified [BR:
hhip04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117770350 (snx27a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
SNX17-27-31_F1_FERM
RA_2
VirE3
PDZ_2
SNX17-31_F2_FERM
SNX17_FERM_C
DarA_N
USP7_C2
Motif
Other DBs
NCBI-GeneID:
117770350
NCBI-ProteinID:
XP_034455603
LinkDB
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Position
11:complement(6525265..6537436)
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AA seq
570 aa
AA seq
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MADVGGDETRSAQPSASRNGPAAGSSAAAATAAADTAGQTATTVTSGPRSVRIVKSESGY
GFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGIAKGDRILEVNGVSVEGAT
HKQVVDLIRAGEKELVLAVLSVPPQESDGLEGGEEVQLNYDYSDKQAVPISVPTYKHVEQ
HSERFVVYNVYMSGRQLCSKRYREFAILHQNLKREYSNFIFPKIPGKWPFSLSEQQLDAR
RRGLEEYLERVCSVRVIGESDIMQEFLSESDENYNGVTDVELRIALPDKTTISVRVRKNS
TTDQVYQALVLKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCL
ALRKWLFSFQEEELLRDNPLALHYCFHQALDDVKKGFIKTEDKSYQLQKLAEQRKMATYL
SLLRTCEGYNEVAFPHCSCDSRRKGHVITAISIHHFKLHACTEDGTLENQVIAFEWGEMQ
RWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKQVEEEASDKD
NKNCSNTEILPPLETQQKGWRHLGGEIATS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtaggaggcgatgaaactcggtcggctcagccttcggcatcccgcaacggt
ccggccgccggttcctcggctgcggcggcgacggcggcggcggacaccgcgggccagacc
gccaccacggtaacgtcgggtccgcgttcggtgaggatcgtcaagtcggagtccgggtac
gggttcaacgttcgcggtcaagtcagcgaaggagggcagctccggagcatcaacggggaa
ctgtacgctccgctgcagcatgtcagcgccgttctgcccggaggagcggcggaccgagcc
gggatagctaagggtgaccggatcctggaagttaatggggtgagcgtggaaggtgccacc
cacaagcaggtcgtggacctgatccgtgcaggggagaaggagctggttctggctgtgctc
tccgttccacctcaggagtccgatgggttggaaggaggagaggaagtccaactaaactat
gactacagcgacaagcaggctgtgcccatttctgttcccacgtacaaacatgtagagcag
cactccgagaggtttgtggtgtacaatgtgtacatgtcaggtaggcagctgtgctcaaag
cgctaccgggagttcgccatcttgcaccagaacctaaagagagagtattccaacttcatc
ttcccaaagattccagggaaatggcccttctccctttctgaacagcagctggatgctcgg
cgtagaggcctggaggaatatcttgagcgagtttgctctgtgcgggtgatcggggagagc
gacatcatgcaggagtttctctctgaatcagacgagaactacaatggagtgacagatgta
gaactgcggatagccctgccagacaagaccaccatctccgtcagagtccgcaagaacagc
accacagaccaggtgtaccaggcgttagtgttgaaggttggaatggacagtattatggcg
agctactttgccctttttgaggtcatcaaccattcctttgtacggaagctggcgcccaat
gagtttccccacaagctttacgtgcagaactacacgtcggcggtgccggggacttgcttg
gcgctccgcaaatggttgttcagcttccaggaggaggagttactaagagacaatccgctg
gcactgcactactgctttcaccaggcattggatgatgtgaagaagggattcataaaaaca
gaggacaaatcctaccagctgcagaaactggcagagcagcgcaagatggccacgtacctg
agcctgttacggacgtgtgagggctacaacgaggtcgcgttcccacactgctcctgcgac
tccaggaggaagggacatgtcatcacagcgatcagcatccatcacttcaagctgcacgcc
tgcacggaggacggcacgctggagaaccaggtgatagcgtttgagtggggggagatgcag
cgctgggacactgacgaggaggggatggctttctgcttcgagtatgccagaggggagaag
aaacctcgctgggtcaagatcttcactccatattttaactacatgcacgagtgctttgag
cgggtcttttgtgagctgaagtggaggaaacaggttgaggaagaggcatctgacaaagac
aacaaaaactgcagtaacactgagattctgcctcctctggagacgcagcaaaagggatgg
cgccacctagggggggagattgcaacttcctaa
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