Hippoglossus hippoglossus (Atlantic halibut): 117770465
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Entry
117770465 CDS
T07778
Symbol
pum1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
CFAP61_N
Motif
Other DBs
NCBI-GeneID:
117770465
NCBI-ProteinID:
XP_034455842
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Position
11:10648759..10672425
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AA seq
1176 aa
AA seq
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MSSVCVLKRKAVLWQDSFSPHHRTTSPSMPVVLSSGGHAPPTGQTPQATPPSQQGVAGAG
RSQDDAMVDYFFQRQHGEQPGKHRWPTGDNIHDSQVRSMDELNHDFQALALEGRAMGEQL
LTGKKFWEADDSGKDGPKGIFLDQWRDSAWGASDHSVSQPIMVTRRPGQGFHGGGEVGVG
SVMSPRSESGGLGVSMVEYVLSSSPADKLDSCLRKGPYGQRDGEVEEEKREKPKATFEGE
KLKELTEAEADVISDVINPNGLPVQNGLDVDVKEFCRPPGNMPAPGPEGDLLGGQGGVGA
EGMTPLGGGGGPKPPEDFSGVEQGGVTMDPMESVMEPLQFDYNSQMPMDSAPTVGLFDYA
NQQQQLFQRNNALAVQQLTAAQQQQYALAAAQQSHIGLAPAFVPNPYIISAAPPGTDPYA
AGLAAAATLGPAVMPPQYYGVTPWGVYPANLFQQQAAAANNSANQQAANQGQQNQQQVMR
GGGNQRPLTPSQGQQNQQNDQLVAAAAVNSALAFGQGLAAGVPGYPVLAPAAYYDQTGAL
VVNTGGRNGPVRLMAPGSVIISPSAAQAVAAAAASAGGANGGLGGGANGPFRAMQSQQAQ
QQGGPGGALGGSSFYGSSSLSSSSQSSSLFSQGSGQPGPGSASLGFSQPNSSSLGASLGA
TLGGFGTAGWNTPYHVLCRMMANSSGGSGSRRDSLTGNNELYKRTPSSLTPIGHGGFYNG
TLGFSPSPGPVGMPLPNQGPSHSLTPPPSLSNHSSSSNLNLGGLTNGSGRFISAAPGAEA
KYRSAASSGSSLFSPSSQLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLRDIAGH
IMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLD
QKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNG
NHVVQKCIECVQPHALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELH
QHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVTHAS
RAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHIST
LRKYTYGKHILAKLEKYYMKNGVDLGPLCGPPNGIM
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgtgtgtgtgttgaagaggaaagcagtgctctggcaggattcattcagcccc
caccatagaactacatctcccagcatgcccgtggtgctgagcagcggaggacatgcccct
ccaactgggcagacccctcaggccacaccccccagccaacagggtgtggcgggtgctgga
cgttcccaggatgatgccatggtcgactacttcttccagcggcagcacggtgaacagcct
ggcaaacatcgctggcccactggagacaacatccatgacagccaggtgcgatccatggac
gagttgaaccatgactttcaggctctggctttggaggggcgcgccatgggagagcagctg
ctcactggtaaaaagttctgggaagcggacgactctgggaaggacggaccaaaagggatc
ttcctggaccagtggagggacagtgcatggggtgcctcagatcactcagtctctcagcca
atcatggtaacccgtcggccaggccaaggtttccatggcggaggtgaagttggcgtgggc
tcggtgatgtcaccgcggtctgagagtggagggctgggagttagcatggtggagtacgtc
ctctcctcctcaccagctgacaaactggattcctgccttcggaaaggaccctacgggcag
agggatggagaggtggaggaagagaagagggagaagccaaaggcaacgtttgagggagag
aaactcaaagagttgacggaagctgaagctgatgtcatcagcgacgtcatcaatcccaat
gggctgcctgtgcagaatggcctcgatgtggatgtcaaagagttttgtcgtcccccgggc
aacatgccggcccctggccccgagggtgacctgcttgggggtcaaggcggtgtaggggct
gagggcatgacacccttaggagggggtggaggccccaagccccctgaggacttctctggt
gtagaacagggtggtgtcaccatggaccccatggagtcagtgatggagccgcttcagttt
gattacaactcccagatgcccatggactctgcgcccactgtgggtctatttgattacgct
aaccagcagcagcagctgtttcagagaaacaatgcacttgcagtgcagcagttaacagca
gcccagcagcagcagtacgccttggcagcagcacagcagtctcacattggtctggcccca
gcgtttgtgcccaatccttacatcatcagtgctgctccacctgggacagacccatacgca
gctggactagcagcagcggccacgcttggtccggcagtcatgcctccccagtactacggt
gtgaccccctggggggtctaccctgccaaccttttccagcagcaagctgctgccgctaac
aactcagccaatcagcaggcagcaaaccagggccagcagaaccaacagcaggttatgcgt
ggtggtggcaaccagcgacctctgacccccagccaaggtcagcagaatcagcagaatgac
cagctggttgcagcagcggccgtcaactcggccctcgccttcgggcaggggttagcggca
ggagtccctgggtacccggtattggcccctgcagcctactatgatcagacaggggccctg
gtggtcaacactggagggaggaatggccctgtccgcctgatggccccaggctctgtcatc
atatctccctccgcagcacaagcagttgcagccgctgcagcatccgcaggtggtgccaac
gggggtctcggtggtggggccaacggtccattccgtgccatgcagtcccagcaggctcag
cagcagggtggccccggtggtgctcttggagggagctccttctacggatcctcctccctc
agttcctcctcccagagctcctctcttttctcacaaggctcagggcagccggggcccggg
tctgcctcgttgggattcagccagcccaactcctcatcccttggtgccagtctgggggct
acgctgggaggctttggcactgcaggttggaatacaccttatcacgtgctctgccgtatg
atggccaactcgagtgggggcagcgggtccagacgggactccctgacaggcaacaatgag
ctgtataaacgcacgccctccagcctcaccccgatcggccacggaggcttctataacggc
accctgggcttcagcccctcccctggccctgtgggcatgcccctgccaaaccagggcccg
tctcactccctcacacccccaccttccctgtccaatcacagctcctcgtccaaccttaat
cttggaggtctgaccaatggcagcgggcgtttcatctccgctgccccgggagcggaggcc
aagtaccgcagcgccgccagctcaggctcctccctcttttcacccagcagccagctgttc
ccgtcatcacggctacgctacggcatgtcagacgtgatgccgtcgggccgcagccgcctg
ctggaggacttcaggaacaaccgctaccccaacctgcagctcagagacattgccggccac
atcatggagttcagccaggaccagcacggcagcaggtttatccagttgaaattggagcga
gccagttccgcggagcgccagcttgtcttcagtgagatactccaggctgcctaccagctt
atggtggacgtctttggaaattatgtcatccagaagttttttgagtttggcagcctggac
cagaagctggctctggcagagaggatccgaggtcacgtgctgtctctggccctgcagatg
tacggatgcagggtcattcagaaagctctggagttcatcccctcggatcagcaggtcatt
agtgagatggtgcgggagctggacggccatgtgttgaagtgcgtgaaggaccagaatggt
aaccacgtggtgcagaagtgtattgagtgtgtccagcctcacgcactgcacttcatcata
gacgccttcaagggacaggtttttgctctctccactcacccttacggctgccgggtcatc
cagcgcattctcgaacactgccttcctgaacagacgctgcctatactagaggagctccat
caacacacagagcagctagtgcaggaccagtatggaaactatgtgatccagcacgttttg
gagcacggccgagcagaggataagagcaagatagtggcggagatcagaggcaatgtgctg
ggacttagccagcacaagtttgccagtaatgtggtggagaagtgtgtgacccacgcgtcg
agggcagaacgggcggtgctgatagatgaagtgtgcagcctgactgagggcccccacagt
gccttatacaccatgatgaaggaccagtacgccaactacgtggtgcagaagatgatcgac
gtggctgagccaacccagcgcaagatcgtaatgcacaagatccggccccacatctccacc
ctgaggaagtacacctacggaaaacacatcctggccaagctggaaaaatactacatgaag
aacggcgttgacctgggtcctctttgtggcccacctaacggcatcatgtga
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