Hippoglossus hippoglossus (Atlantic halibut): 117770469
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Entry
117770469 CDS
T07778
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117770469 (trim71)
04121 Ubiquitin system [BR:
hhip04121
]
117770469 (trim71)
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117770469 (trim71)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117770469 (trim71)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117770469 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
ANCHR-like_BBOX
SGL
TEN_NHL
zf-RING_5
zf-C3HC4
Ig_GEX2_N
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
117770469
NCBI-ProteinID:
XP_034455858
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All DBs
Position
11:complement(15491599..15524973)
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AA seq
833 aa
AA seq
DB search
MASFPDSDLQTCPLCKELCGSSAPISSSSSTSSSSSHTSSSSSQTTRRLHVLPCLHAFCR
QCLEGQRSPGDPLKLRCPTCDQKVSISEAGMDSLPSSNFLFSNLLDVVVSSEEQIQSKNG
HHHHHHRGGLGVGSSGFHLPHGGLLHPHHLGEPQCSSCDEENPATSHCLDCQEYLCDNCV
RAHQRVRLTKDHFIERLGESLHLGRVNSNSNQGQPGVSVSLAQSLQNNFALLSLFQDRMS
FCQHHDNEVFLFFCETCSVPICRECSVGRHMGHTFVYLQDAVQDCRAITIQLLADAEQGR
QAVQLSMEKVQAMAEQVEIKAKVVQTEVKALVLRHKKALEERECELLWKVEKIRQVKAKS
LYLQVEKLHQSLTKLDSTIAAVSQVLDEGHHLDVLLARERMLTQIHELKALRGLLQPQED
DRFMFTPPDQALYIATQSMGLISSGAFAPVTKAHGEGLKSALRGKPASFTVIGYDHDGEP
RLSGGDTVSSIVMSVGDGNLSAAEVTDHQNGSYTVSYVPKCEGELLVSVLVCNQHIQGSP
FKVIVKSGRSYGSLGSQVASFGCEGEGDGQLCRPWGISVDKEGYVVVADRSNNRVQIFKP
CGAFHHKFGSLGSRPGQFDRPAGVACDSQRRIIVADKDNHRVQVFTFEGQFLLKFGEKGT
KNGQFNYPWDVAVNSEGKILVSDTRNHRVQLFAADGSFLNKYGFEGALWKHFDSPRGVAF
NHEDHLVVTDFNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQENRIIVADSRN
HRVQVFEPNGNFLCKFGTQGSGFGQMDRPSGVAVTPDGVIVVVDFGNNRILKF
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttccagactcggacctgcagacgtgcccgctctgcaaggagctatgcggc
tcctctgctcccatctcctccagctcttctacctcctcctcctcctcgcacacctcgtcc
tcctccagccagaccaccaggagactccacgtcttgccctgcctccacgccttctgcagg
cagtgcctcgagggccagcgcagtcccggggacccgctgaagctgcggtgccccacctgc
gaccagaaggtgtccatctccgaggccggcatggactccctgccttcctccaacttcctc
ttcagcaacctactggacgtggtggtgagctccgaggagcagatccagagcaagaacggc
caccaccaccatcaccaccgaggaggcctaggtgtgggctcctctggcttccatcttccc
catggaggcctgctgcatccacaccacctgggtgagcctcagtgtagctcctgtgatgag
gagaacccagccacctcccactgccttgactgccaggaatatctgtgtgacaactgtgtg
cgggcacaccagcgggtgaggctgaccaaggaccacttcattgagcgcctgggagagagt
ctccatctgggccgggtcaactccaacagcaaccagggccagccaggggtgtccgtgtcc
ctcgcccagtccctgcagaacaactttgccctgctgtcccttttccaggaccgcatgagc
ttctgtcaacaccacgacaatgaggtgttcctgttcttctgcgaaacctgctcggtgcct
atctgcagggagtgcagtgtgggccgtcacatgggccacacctttgtttacctgcaagac
gccgtgcaggactgcagagccatcaccatccagctgctggcagatgcagaacaaggacga
caggctgtgcagctaagcatggagaaggtccaggccatggcagagcaagtggagataaag
gcaaaggtggtgcagactgaggtgaaggcactcgtcctgagacacaagaaagcgctggag
gagagggagtgtgaactactgtggaaggtagagaagatccgtcaggtgaaggccaagtct
ctgtacctgcaagtggagaagctgcaccagagtctgaccaagttggacagcaccatagcc
gcggtcagccaggtgctggatgagggccaccacctcgacgtgctgctggctagggagcga
atgctcacccagatccatgagctcaaggccctcaggggcctgcttcagccgcaagaggac
gaccgcttcatgtttactcctccagaccaggctctgtacatagccacccagtccatggga
ctgatcagtagtggagcctttgccccggtcaccaaagcccacggtgagggtctgaagagt
gcgcttcgtggcaagcctgcctcctttactgtgattggatatgaccatgatggcgagcca
cgtctctccggcggggacacggtgtcttcaatagtcatgtcagttggcgatggtaacctg
tctgcagcagaggtaacagaccaccagaatggctcatacaccgtcagctacgtgcccaag
tgtgaaggggagctcctcgtttcagtgctggtgtgtaaccagcacatccagggcagcccc
tttaaggtgatcgtgaagtcggggcgcagctatgggtctctgggttcacaagtcgcatcc
ttcgggtgtgagggggaaggagacggtcagctctgtcgtccctggggcatcagcgtggac
aaggagggctacgtggtggtggctgatcgcagcaacaaccgtgtacagatattcaagcct
tgtggcgccttccaccataagtttggctctctgggttctcggcctggtcagtttgatcgt
ccagctggggttgcttgtgacagtcagagacgaatcattgtggctgataaggacaatcac
cgtgtacaggtgtttacttttgagggccagttcctgctcaagtttggggaaaagggtacc
aagaatgggcagttcaattatccctgggatgtggctgtcaactctgagggtaagatcctg
gtctccgacaccaggaaccaccgcgtgcagctcttcgccgccgacgggtccttcctcaac
aagtacggctttgaaggggccctgtggaaacactttgactctcccagaggagtggccttt
aaccacgaagaccacctggtggtgaccgacttcaacaaccaccggctcctggtcatccgg
cctgactgccagtcggctcgctttctgggctccgagggcacagggaacgggcagttcctg
cggccccagggtgtcgccgtggaccaggagaaccgcatcatcgtggccgactcccgcaac
cacagagtccaagtgtttgagcccaatggaaacttcttatgcaaatttggcacacagggg
agcggctttggacagatggatcgcccctccggtgtggctgtaacgcctgacggagtcatt
gtggttgttgactttggaaataatcgcattctcaaattctaa
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