Hippoglossus hippoglossus (Atlantic halibut): 117770482
Help
Entry
117770482 CDS
T07778
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117770482 (vps50)
Membrane trafficking [BR:
hhip04131
]
Protein recycling
Others
EARP complex
117770482 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Kgd4-YMR31
Motif
Other DBs
NCBI-GeneID:
117770482
NCBI-ProteinID:
XP_034455877
LinkDB
All DBs
Position
11:11872623..11976354
Genome browser
AA seq
977 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESMADLSPVENLRIPSKEELREMREQSIDPQAEQEIINSIEEV
YFSNDSFDMVQHELEKLPPELNLQELEEHRDKLKRQQAAVSKKVADLILEKQPSYVKELE
RVTALQTNLQLAAVICTNARRQLSVSKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITPDSYIPCLTDLCKALWEVMLSYHRTMQWHEEQDKQEAAPAPDG
AAAAKSDELVVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSNFKYDDFIVVLDVIS
KLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNI
AQLHCLSVPSSPLQEFKFMGQCRSPSVSPSKQAASSSTPAQEELSLFQEYLQEGNPFEMH
IEEKEEETEDVLASNGYESDELEKSVYQDYDSDSDVPEELKQDYVDEQTGDAPLKSLSRE
TIRSKKKSDYNLNKTNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYL
YAVYTFFGRNDMYESSGLGLISSRLRTTLNRIQENLIDMEALGENAGVHGPAEDRKEKVP
SPHLSQLVVLTNSGTLYGLAQRVVATESLVFLAEQFESLQSHLDTMMPAAKKPFLQQFYS
QTVSTASELRKPIYWIVAAKAIDYEQMLLLMSGVKWDIREIMSQHNVYVDVLLKEFEEFN
KRLGDVSRHVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMK
LEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQLANLVNVCLGSHINKK
ARQKLLAAIDDIDRPKR
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtctctcatggcccggcagggcctgaagagcccccaggagagcatg
gctgacctcagtcctgtggagaacctgaggatccccagcaaggaggagctgcgggagatg
agggaacagtccatcgacccccaggcggagcaggagatcatcaacagcattgaggaggtc
tacttctccaacgactccttcgacatggtgcagcacgaactggagaagctcccacctgag
ctgaacctgcaggagctggaggagcatcgagacaagctgaagagacaacaggcagcagtt
tctaaaaaggtcgcagatctcattctggagaaacagccctcttatgtcaaggagctggag
agagtaaccgcgttacagaccaacctgcagctggcagcagtcatttgcacgaacgcaagg
agacaactgagcgtgtcgaaggaaggattcacagaggccagcctgggtctacttgccaat
cagagaagacgacaactgctgacaggcttgctcaagtctctgaggaccatcaagacactg
caaagaacggatgtaagactcagcgagatgcttgaggaggaagactacccaggtgcaatc
cagctctgtctggaatgtcagaaagctgccagcacctttaaacactacagctgcatcagt
gaattgaattccaaactacaagacaccctggagcaaatagaggagcagcttgatgtcgcc
ctgtcgaagacgtgtaagcacttcgatgtttcgcactacaccaaggtccagctggcctac
acgctcctgggcaagacacagaccgctatggaccagctgcacatgcacttcacccaggcc
atccacaacactgtgttccaagtggtgctgggatacgtggagctgtgtgctggcaacgct
gacaccaagttccagaagatgcaatacaaggacctgtgcacgcacatcaccccggacagc
tacatcccctgcctgacagatctgtgcaaggcattgtgggaggtgatgctgagctaccac
cgcaccatgcagtggcacgaggagcaagacaaacaggaggccgcaccagctccagatggt
gcagcagcagcaaagtctgatgagttggttgtggaccgcagctacgtgaagaagaaactg
gagcacggtctgacacggatctggcaggatgtccagttgaaagtgaaggcctacatcctg
ggcacggacatgtccaacttcaaatatgatgatttcatagtggtactggacgtcatcagc
aagttgatgcaggtgggtgaggagttctgcggcagcaagtccgaggtcctgcaggagtca
atcaaacgccagagcgtcaactacttcaaaaactaccacagggcacgactggaagaacta
aggatgtttctggagaatgagacgtgggaactttgtcctgtcaagtcgaacttcaacatc
gcccagctccattgtctctctgtcccatcttctccgctccaggagtttaagttcatgggc
cagtgtcgctcgccgtccgtctccccgagcaaacaggccgcgtcctcgagcacaccggcc
caggaggagctgtcactcttccaggagtacctccaggaggggaacccgtttgagatgcac
atcgaggagaaagaggaggagacagaggatgtgctggcatccaacggatatgagtcagac
gagctggagaagagcgtttatcaggattacgacagcgacagcgacgtccccgaggagctc
aagcaggactacgtggacgagcagacgggagacgcccctcttaagagcctgtcccgagag
accataagaagcaagaagaagtcagactacaaccttaataagaccaatgcaccaatcctc
accaacaccaccctcaacgtcatccggctcgtggggaagtacatgcagatgatgaacatt
ctgaagccgatcgccttcgacgtcatccactgtgtgtcacagctcttcgactactacctg
tacgccgtatacaccttctttggacgcaatgacatgtatgagtcatcgggtctgggcctt
atcagcagcagactgagaaccacactgaaccggatccaggagaacctcattgacatggag
gcgctaggggagaatgcaggcgtccacggcccagcagaagacaggaaggagaaggtgccc
agcccccatctcagccagctggtggtcctcaccaacagtgggactctgtatgggctcgca
cagagggtggtggccactgagtctctcgtgtttctggctgagcagttcgagtccctccag
tcccacctggacacgatgatgcctgcagccaagaagcctttcctgcaacagttttattcc
cagacggtttctacagccagtgaactgcggaaacccatctactggatcgtggcagccaag
gccatcgactacgaacaaatgttgctgttgatgtctggagttaaatgggacatcagggag
ataatgtcacagcacaacgtatatgtggacgtccttttaaaggagtttgaggagtttaac
aagcggctgggtgatgtttccagacacgtgcgcatcccgctgcctgtgtccaacgtcctt
tgggagcactgcatccgtctggccaacaggactcttgtcgagggctacgctaacgtgaag
aagtgtagcaacgagggccgcgccttaatgcagctggacttccaacagttcctcatgaag
ctggagaagctgaccgacctgagacccatccccgacaaagagtttgtggagacctacatc
aaggcttattacctgacggagaacgacatggagcagtttatcaagaatcacagggagtac
tccatgaagcagctcgccaacttggtgaacgtttgcctgggctcacatataaacaagaaa
gctcgtcagaaactcctggcagccatcgacgacatcgacagacccaagagatag
DBGET
integrated database retrieval system
