Hippoglossus hippoglossus (Atlantic halibut): 117770587
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Entry
117770587 CDS
T07778
Symbol
khdrbs1b
Name
(RefSeq) KH domain-containing, RNA-binding, signal transduction-associated protein 1b
KO
K13198
KH domain-containing, RNA-binding, signal transduction-associated protein 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhip03041
]
117770587 (khdrbs1b)
Spliceosome [BR:
hhip03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117770587 (khdrbs1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Qua1
Sam68-YY
KH-I_KHDC4-BBP
KH_1
STAR_dimer
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
117770587
NCBI-ProteinID:
XP_034456073
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All DBs
Position
11:complement(16759951..16775293)
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AA seq
355 aa
AA seq
DB search
MENDDKYLPELLAEKDSLDSSFTHAMKLLNAEIDRIQKGETKKEAEAYLDLFTTKNIKLK
ERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKTKEEGLRKGGE
PKYAHLSMELHVFIEVFAPVPDAYLRMAHAMEEVKKFLFPDMMDDICQEQFMEMSYLNGG
QEHVARGRGGMPVRGRGIPPAGAHRGRGMPPRGAAPRGGVSRGGPVRGAPGGRGGPPAAP
ARGAAAPRARPPAAGPPQRMAPPHQHASTTGQESYDEYGYDESYTDPTYESYDSYYSQPQ
AEPEYFDYGHGETTESYESYGQDNWNGTQQLGPGKAPPPSRGAKTPYREHPYRQY
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgacgacaagtacctccccgagctgctggcggagaaggacagcctggactcg
tcgtttacgcacgccatgaaacttttaaacgcagaaattgatagaatccagaaaggcgag
actaaaaaggaggcagaagcatacctggaccttttcacaacaaagaacatcaaacttaag
gaacgcgtgctcatacctgtcaaacagtacccgaagttcaattttgtggggaagattttg
ggacctcagggcaacacaatcaaacggctacaggaagagactggagccaagatctctgtg
ctgggcaaaggatccatgagagacaaaaccaaggaggaggggctgagaaaaggcggcgag
cccaagtacgcacacttgtccatggagctgcacgtgttcatcgaggtgtttgcccccgtg
cccgacgcctacctgcgtatggcacacgccatggaggaggtcaagaagttcctgttccca
gatatgatggatgatatctgccaagagcagttcatggagatgagctatctgaacggaggc
caggagcacgtggcccgaggtcgagggggcatgccggtcaggggccgtgggatccctcct
gctggagcacacaggggtaggggaatgcctcctcgcggtgctgcccccaggggaggtgtg
agtcgaggtggcccagtgaggggcgccccgggaggccgaggaggaccccctgcagcacct
gccaggggagctgcggcaccccgcgccaggcccccagctgctggacctccccagaggatg
gccccccctcaccagcacgcatccaccactggccaagagagctacgatgaatatggctac
gacgagagctacacagacccgacctacgagtcatacgacagctattacagtcagccgcag
gcagagccagaatactttgactacggacacggagagaccacagagtcgtacgagtcgtat
ggccaggataactggaacgggacccagcaattagggccagggaaggcccctcccccctcc
agaggtgccaagacgccttaccgggagcacccataccgacagtactga
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